Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 RNU6-200P-201ENST00000364743 107 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 SP140-202ENST00000373645 814 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 MRPS6P2-201ENST00000381143 370 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 IGLJ2-201ENST00000390322 175 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 U3.25-201ENST00000391209 220 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 HMGB3P1-201ENST00000393368 573 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 AL583834.1-201ENST00000406943 343 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 RPSAP72-201ENST00000407020 358 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 AL590632.1-201ENST00000424289 371 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 RPS17P8-201ENST00000434525 335 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 UBBP5-201ENST00000446970 266 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 RPS15AP27-201ENST00000449183 343 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 AL031736.1-201ENST00000449688 618 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 AC022730.2-201ENST00000465359 452 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 RN7SL145P-201ENST00000469955 296 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 RPS23P3-201ENST00000470993 430 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 AC090686.1-201ENST00000481577 749 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 RPL7P51-201ENST00000490532 749 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 TRIM77BP-201ENST00000524985 1119 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 HNRNPCP8-201ENST00000528764 888 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 GLYATL1P4-201ENST00000529326 906 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 AP003385.6-201ENST00000531603 374 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 AC243312.1-201ENST00000570582 275 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 MIR4786-201ENST00000583954 80 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 AC007603.3-201ENST00000636915 979 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 WBP11P1-201ENST00000562560 1931 ntBASIC6.69□□□□□ -1.34
USB1Q9BQ65 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 GPI-202ENST00000415930 4000 ntTSL 2 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
USB1Q9BQ65 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC6.69□□□□□ -1.34
USB1Q9BQ65 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 HSPD1P8-201ENST00000400121 1658 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC138627.1-203ENST00000641872 1680 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 Y_RNA.222-201ENST00000364264 102 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 RNU1-16P-201ENST00000365477 164 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 RNU6-128P-201ENST00000383976 107 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 Y_RNA.483-201ENST00000384380 101 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 MIR555-201ENST00000384987 96 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC017104.2-201ENST00000417000 321 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AL137014.1-201ENST00000420490 1226 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 PRUNEP1-201ENST00000425846 705 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC244505.2-201ENST00000435089 759 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC019185.3-201ENST00000438805 323 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC099799.1-201ENST00000439809 192 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC105399.1-202ENST00000447303 205 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 RN7SL308P-201ENST00000464971 297 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 PLGLA-201ENST00000465668 449 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 RPL39P38-201ENST00000467018 153 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 TBCAP3-201ENST00000512475 312 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC093853.1-201ENST00000515689 483 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 RNA5SP116-201ENST00000516132 98 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 RNA5SP384-201ENST00000516615 116 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 RN7SKP98-201ENST00000517070 156 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 AP003032.1-201ENST00000526730 277 ntTSL 3 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 REG4-204ENST00000530654 612 ntTSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 OR5D17P-201ENST00000531492 978 ntBASIC6.68□□□□□ -1.34
USB1Q9BQ65 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
USB1Q9BQ65 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms