Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC027290.2-201ENST00000623210 18662 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS50Q96JG6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS50Q96JG6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS50Q96JG6 RNA5SP223-201ENST00000365174 120 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 RNU6-157P-201ENST00000383957 107 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 MIR765-201ENST00000390226 114 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AL645927.1-201ENST00000396783 406 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AL133270.1-201ENST00000402635 279 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 RNU4-72P-201ENST00000410754 173 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 QRSL1P2-201ENST00000418582 964 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 GAPDHP49-201ENST00000421421 961 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC005033.1-201ENST00000428904 813 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 GTF2IP7-202ENST00000436677 309 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AL445567.1-201ENST00000439121 144 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 TXNP5-201ENST00000441043 315 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC073587.1-201ENST00000447093 876 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC005532.2-201ENST00000467154 373 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 CCDC75P1-201ENST00000469247 791 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 RN7SL727P-201ENST00000482164 296 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC022360.1-201ENST00000521058 340 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS50Q96JG6 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 OR4C2P-201ENST00000530855 1064 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AP005136.1-201ENST00000579765 429 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC110760.3-201ENST00000598794 467 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 DPRXP5-201ENST00000604662 539 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AL008729.2-201ENST00000606393 473 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC131238.1-201ENST00000617135 328 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS50Q96JG6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS50Q96JG6 SCN1A-220ENST00000641603 12506 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS50Q96JG6 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.02□□□□□ -1.61
VPS50Q96JG6 AC063976.2-201ENST00000425667 3556 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC009229.4-201ENST00000623854 1947 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 A2MP1-204ENST00000566278 4130 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC109780.1-201ENST00000451768 1344 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 LINC01355-201ENST00000566551 5444 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 RNU1-43P-201ENST00000365052 165 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 ATP5F1P3-201ENST00000397213 657 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 EIF4A1P3-201ENST00000411521 244 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 CYCSP10-201ENST00000417973 294 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC016907.1-201ENST00000419483 435 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AL009174.1-201ENST00000426577 416 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 MTCO1P3-201ENST00000429327 192 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AL161722.2-201ENST00000434731 981 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 AL772161.1-201ENST00000439130 476 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 TPTE2P6-202ENST00000445572 1007 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 HMGB1P48-201ENST00000446155 598 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 RHEBP2-201ENST00000450289 600 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 Z92846.1-201ENST00000456203 268 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS50Q96JG6 RN7SL222P-201ENST00000476452 299 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 RPL7P6-201ENST00000480903 738 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS50Q96JG6 RN7SL97P-201ENST00000486780 299 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 RPL32P9-201ENST00000487963 407 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC104971.1-201ENST00000495117 578 ntBASIC5.01□□□□□ -1.61
VPS50Q96JG6 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms