Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
HLA-CQ95604 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.08□□□□□ -1.28
HLA-CQ95604 NDRG3-203ENST00000373773 2098 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HLA-CQ95604 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
HLA-CQ95604 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
HLA-CQ95604 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC009166.2-201ENST00000624410 2833 ntBASIC7.08□□□□□ -1.28
HLA-CQ95604 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.08□□□□□ -1.28
HLA-CQ95604 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
HLA-CQ95604 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HLA-CQ95604 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
HLA-CQ95604 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
HLA-CQ95604 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
HLA-CQ95604 HSPA8P11-201ENST00000508840 1898 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-CQ95604 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.07□□□□□ -1.28
HLA-CQ95604 AC011460.1-201ENST00000636268 1834 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.07□□□□□ -1.28
HLA-CQ95604 RNU5E-8P-201ENST00000363502 116 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 RNU1-85P-201ENST00000364127 164 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 RNA5SP172-201ENST00000365061 118 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 RNU6-729P-201ENST00000384399 107 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 RNU6-601P-201ENST00000384540 107 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 RNU6-310P-201ENST00000384655 107 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 AC093155.2-201ENST00000420734 937 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AC092832.1-201ENST00000422934 400 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 DUTP4-201ENST00000424782 475 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 PRUNEP1-201ENST00000425846 705 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-CQ95604 HMGB3P11-201ENST00000440127 604 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 RPS24P6-201ENST00000452670 400 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 RPL12P25-201ENST00000455592 494 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 TRBV26-201ENST00000456572 344 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 RPS29P15-201ENST00000458329 171 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 MIR2053-201ENST00000459295 91 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 AC008638.1-201ENST00000506035 866 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AC092436.1-201ENST00000506450 503 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 RNU6-635P-201ENST00000516651 102 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 RNU6-388P-201ENST00000517012 105 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 RNU6-389P-201ENST00000517048 105 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AC105031.1-201ENST00000518550 476 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 AP000827.1-201ENST00000527814 258 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 MIR4703-201ENST00000577728 79 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AC008507.3-201ENST00000585753 472 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AC023043.2-201ENST00000589678 1026 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC7.07□□□□□ -1.28
HLA-CQ95604 RPL23AP92-201ENST00000603609 255 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AL121992.2-201ENST00000606262 256 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AL008729.2-201ENST00000606393 473 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 SNORD96A-201ENST00000606577 79 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC7.07□□□□□ -1.28
HLA-CQ95604 AC024884.1-201ENST00000620583 399 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.07□□□□□ -1.28
HLA-CQ95604 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-CQ95604 AC092724.1-201ENST00000624623 3397 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 LGI1-211ENST00000630047 1751 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-CQ95604 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-CQ95604 AC104118.1-201ENST00000607625 1589 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.07□□□□□ -1.28
HLA-CQ95604 PNPT1P2-201ENST00000456768 2050 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.07□□□□□ -1.28
HLA-CQ95604 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HLA-CQ95604 AKAP17BP-201ENST00000431706 2719 ntBASIC7.07□□□□□ -1.28
HLA-CQ95604 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HLA-CQ95604 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms