Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AL513478.4-201ENST00000641636 310 ntBASIC5.26□□□□□ -1.57
XRN1Q8IZH2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.26□□□□□ -1.57
XRN1Q8IZH2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 DDX18P6-201ENST00000450119 1997 ntBASIC5.25□□□□□ -1.57
XRN1Q8IZH2 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 AL512649.1-201ENST00000428997 581 ntBASIC5.25□□□□□ -1.57
XRN1Q8IZH2 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 SNORD105B-201ENST00000458770 79 ntBASIC5.25□□□□□ -1.57
XRN1Q8IZH2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 AC133552.5-201ENST00000604266 540 ntBASIC5.25□□□□□ -1.57
XRN1Q8IZH2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 AP000553.6-201ENST00000641242 118 ntBASIC5.25□□□□□ -1.57
XRN1Q8IZH2 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
XRN1Q8IZH2 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 AC005019.1-201ENST00000436455 431 ntBASIC5.24□□□□□ -1.57
XRN1Q8IZH2 PSMC1P13-201ENST00000458195 985 ntBASIC5.24□□□□□ -1.57
XRN1Q8IZH2 RN7SL271P-201ENST00000487601 295 ntBASIC5.24□□□□□ -1.57
XRN1Q8IZH2 RPL31P61-201ENST00000496160 376 ntBASIC5.24□□□□□ -1.57
XRN1Q8IZH2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.24□□□□□ -1.57
XRN1Q8IZH2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 VDAC2P1-201ENST00000399358 958 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 DBIP2-201ENST00000419076 262 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 SETP9-201ENST00000423837 832 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AL049873.1-201ENST00000480540 376 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 MAPK10-253ENST00000641010 4072 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AC009229.4-201ENST00000623854 1947 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 OR52Y1P-201ENST00000452418 828 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AC069240.1-201ENST00000548774 375 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AC068020.1-201ENST00000594215 661 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.23□□□□□ -1.57
XRN1Q8IZH2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.23□□□□□ -1.57
XRN1Q8IZH2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 AC118273.1-201ENST00000525324 3006 ntBASIC5.22□□□□□ -1.57
XRN1Q8IZH2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 RPL12P18-201ENST00000437175 325 ntBASIC5.22□□□□□ -1.57
XRN1Q8IZH2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 AC017015.1-201ENST00000477387 286 ntBASIC5.22□□□□□ -1.57
XRN1Q8IZH2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 MTND6P33-201ENST00000571794 183 ntBASIC5.22□□□□□ -1.57
XRN1Q8IZH2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 AC007529.1-201ENST00000418574 2178 ntBASIC5.22□□□□□ -1.57
XRN1Q8IZH2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
XRN1Q8IZH2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
XRN1Q8IZH2 AL365440.1-201ENST00000436135 2167 ntBASIC5.21□□□□□ -1.58
XRN1Q8IZH2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.21□□□□□ -1.58
XRN1Q8IZH2 AC073063.1-201ENST00000434352 607 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms