Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 SETP9-201ENST00000423837 832 ntBASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 DUX4L52-201ENST00000549363 777 ntBASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AC243654.2-201ENST00000612843 443 ntBASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AL591424.2-201ENST00000617023 128 ntBASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 AL392088.2-201ENST00000637607 285 ntBASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC141Q6ZP82 HCFC2P1-201ENST00000392864 1592 ntBASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 OR51A6P-201ENST00000418680 1004 ntBASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 GNG5P5-201ENST00000420444 220 ntBASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 PPBPP1-201ENST00000510807 373 ntBASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 AC006960.3-201ENST00000561845 705 ntBASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 AC005261.6-201ENST00000623072 1387 ntBASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CCDC141Q6ZP82 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC141Q6ZP82 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC141Q6ZP82 AC007823.1-201ENST00000569932 1566 ntBASIC5.65□□□□□ -1.51
CCDC141Q6ZP82 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC141Q6ZP82 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC141Q6ZP82 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 SNORD9-201ENST00000362566 104 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 RN7SKP199-201ENST00000410325 305 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AL590609.2-201ENST00000421430 368 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AC006511.1-201ENST00000470614 315 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 HSPD1P15-201ENST00000505573 1122 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AC233702.9-201ENST00000581528 203 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AL031985.2-201ENST00000600955 480 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 ELOCP35-201ENST00000604289 336 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AP000553.6-201ENST00000641242 118 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 RNU1-33P-201ENST00000364249 162 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 GSTM3P2-201ENST00000412746 530 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 SNORD105B-201ENST00000458770 79 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 SNORA70.17-201ENST00000516449 133 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 ZNF415P1-201ENST00000582279 1166 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 MIR5195-201ENST00000583555 115 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AL160281.1-201ENST00000605307 311 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AL353600.1-201ENST00000608148 251 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 MIR3651-201ENST00000630427 90 ntBASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC141Q6ZP82 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 RNU1-108P-201ENST00000362556 161 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 RNA5SP267-201ENST00000364893 126 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 AC010740.1-201ENST00000417035 684 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 AC011742.1-201ENST00000431448 434 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 SNORA71B-202ENST00000439232 272 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 VN1R25P-201ENST00000443385 738 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 VN1R40P-201ENST00000455196 941 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 RPS4XP10-201ENST00000465034 731 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 SNORA70.24-201ENST00000517233 118 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 OR4A2P-201ENST00000527276 913 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 AC069240.1-201ENST00000548774 375 ntBASIC5.63□□□□□ -1.51
CCDC141Q6ZP82 OR7M1P-201ENST00000608946 533 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms