Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC012557.1-201ENST00000607115 611 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC004825.2-201ENST00000616634 455 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 AP006248.2-201ENST00000623309 592 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC019278.1-201ENST00000623516 479 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 AC091948.2-201ENST00000636510 279 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTR9Q6PD62 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTR9Q6PD62 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 Z73965.1-201ENST00000623412 2297 ntBASIC5.05□□□□□ -1.6
CTR9Q6PD62 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CTR9Q6PD62 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CTR9Q6PD62 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CTR9Q6PD62 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTR9Q6PD62 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTR9Q6PD62 RNA5SP515-201ENST00000364570 118 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RPS26P8-201ENST00000393490 348 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 RNA5SP317-201ENST00000410176 116 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RN7SKP182-201ENST00000410772 298 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RNA5SP311-201ENST00000411290 116 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 UBTFL3-201ENST00000418934 1024 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 RWDD4P2-201ENST00000426392 563 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RPS27AP12-201ENST00000429552 465 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RPS6P12-201ENST00000432491 726 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 EIF2S2P4-201ENST00000461070 984 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 UBTFL6-201ENST00000477929 1024 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 AL161747.1-201ENST00000480068 358 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 SYT14P1-201ENST00000481459 721 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RWDD4P1-201ENST00000488019 565 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 HNRNPKP5-201ENST00000515300 253 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RNA5SP315-201ENST00000516340 116 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 RNA5SP312-201ENST00000517068 116 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 AC067904.2-201ENST00000517322 1283 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 AC135001.1-201ENST00000544546 283 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CTR9Q6PD62 AC008759.1-201ENST00000589783 983 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 AL591034.3-201ENST00000605511 685 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTR9Q6PD62 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 AC015722.2-201ENST00000622210 551 ntBASIC5.04□□□□□ -1.6
CTR9Q6PD62 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.04□□□□□ -1.6
CTR9Q6PD62 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CTR9Q6PD62 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTR9Q6PD62 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 AL451142.2-201ENST00000429076 2090 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTR9Q6PD62 RNA5SP479-201ENST00000364858 117 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTR9Q6PD62 RNU6-1279P-201ENST00000383917 103 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 CYP4F29P-201ENST00000420685 446 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 DNAJA1P1-201ENST00000425106 1187 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 AC092017.2-201ENST00000427600 362 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 OR4C10P-201ENST00000434991 931 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 RPL12P46-201ENST00000436610 195 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 ABCF2P2-201ENST00000450549 296 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 AC012158.1-204ENST00000483430 465 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 MTCO1P35-201ENST00000515270 228 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTR9Q6PD62 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTR9Q6PD62 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 AC007224.1-201ENST00000564410 144 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 SS18L2P2-201ENST00000583960 235 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 AC017076.1-201ENST00000607613 578 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTR9Q6PD62 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.03□□□□□ -1.6
CTR9Q6PD62 AL138721.1-201ENST00000616756 179 ntBASIC5.03□□□□□ -1.6
CTR9Q6PD62 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms