Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 RN7SKP46-201ENST00000515942 234 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AP006289.1-201ENST00000538089 277 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AGGF1P5-201ENST00000567900 919 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 MIR4458-201ENST00000578872 75 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AC011447.4-201ENST00000587562 111 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 HMGB2P1-201ENST00000591146 634 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AL590392.1-201ENST00000604960 446 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AC010857.1-201ENST00000606398 594 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 OR6R2P-201ENST00000609216 300 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 CYCSP41-201ENST00000616920 296 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AC067931.1-201ENST00000624190 671 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 CR392039.4-201ENST00000624968 501 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AL121594.5-201ENST00000631724 573 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 AC135068.12-201ENST00000637370 931 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 DHX9P1-201ENST00000436565 3076 ntBASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDLIM3Q53GG5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.15□□□□□ -1.74
PDLIM3Q53GG5 AC011447.7-201ENST00000624228 1590 ntBASIC4.15□□□□□ -1.74
PDLIM3Q53GG5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDLIM3Q53GG5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
PDLIM3Q53GG5 OR51H2P-202ENST00000641424 3046 ntBASIC4.15□□□□□ -1.74
PDLIM3Q53GG5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PDLIM3Q53GG5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.15□□□□□ -1.74
PDLIM3Q53GG5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.15□□□□□ -1.74
PDLIM3Q53GG5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 GLULP6-201ENST00000399502 913 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AL133388.1-201ENST00000404509 287 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 NUDT19P3-201ENST00000404698 555 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC114814.2-201ENST00000419195 485 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 RPL30P3-201ENST00000424262 333 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC093655.2-201ENST00000425735 631 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AL451062.2-201ENST00000427515 271 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC004975.1-201ENST00000428733 208 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 RPL34P6-201ENST00000432390 345 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 SEPT14P24-201ENST00000447236 180 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC073264.2-201ENST00000448886 166 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC104634.1-201ENST00000452720 462 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AL513533.1-201ENST00000453728 415 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC010285.3-201ENST00000511668 676 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 RNA5SP303-201ENST00000516192 130 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC104417.1-201ENST00000523974 751 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 OR10V3P-201ENST00000525712 725 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 LRRC6P1-201ENST00000532188 885 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC087897.1-201ENST00000550134 156 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC069307.1-201ENST00000602820 447 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC019193.2-201ENST00000610012 634 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 PART1_2.1-201ENST00000612397 250 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC087385.3-201ENST00000620477 187 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC004232.3-201ENST00000622977 525 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC067852.7-201ENST00000623270 535 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC068787.1-201ENST00000623908 691 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AC008785.1-201ENST00000624475 456 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AP000843.1-201ENST00000624880 701 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 AP001642.1-201ENST00000624727 2117 ntBASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PDLIM3Q53GG5 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM3Q53GG5 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM3Q53GG5 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.14□□□□□ -1.75
PDLIM3Q53GG5 AC090229.1-201ENST00000590983 1609 ntBASIC4.14□□□□□ -1.75
PDLIM3Q53GG5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDLIM3Q53GG5 AC092747.4-201ENST00000620519 1861 ntBASIC4.14□□□□□ -1.75
PDLIM3Q53GG5 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms