Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.85□□□□□ -1.79
RFX4Q33E94 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.85□□□□□ -1.79
RFX4Q33E94 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.85□□□□□ -1.79
RFX4Q33E94 MIR4716-201ENST00000579628 84 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 AL354984.3-201ENST00000604803 325 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 AC024940.4-201ENST00000605507 246 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 Mico1.1-201ENST00000611698 204 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 MIR6780A-201ENST00000615089 68 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 AC092159.4-201ENST00000624944 550 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 AC007342.7-201ENST00000624610 2337 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RFX4Q33E94 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.85□□□□□ -1.79
RFX4Q33E94 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
RFX4Q33E94 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.85□□□□□ -1.79
RFX4Q33E94 LINC00561-201ENST00000565815 2738 ntBASIC3.85□□□□□ -1.79
RFX4Q33E94 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFX4Q33E94 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
RFX4Q33E94 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.84□□□□□ -1.79
RFX4Q33E94 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RFX4Q33E94 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFX4Q33E94 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RFX4Q33E94 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC103591.2-201ENST00000265259 766 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 RNU6-304P-201ENST00000364855 107 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RFX4Q33E94 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AL590806.1-201ENST00000415818 853 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 IFNNP1-201ENST00000429219 553 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 MTCO3P21-201ENST00000430791 643 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AL365396.1-201ENST00000430854 671 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 FTH1P16-201ENST00000435241 552 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 VN1R25P-201ENST00000443385 738 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 ARL2BPP10-201ENST00000446487 531 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 EEF1A1P1-201ENST00000447052 739 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AL513533.1-201ENST00000453728 415 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 VN1R40P-201ENST00000455196 941 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 RNU6-1218P-201ENST00000458990 108 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AC010307.1-201ENST00000467206 836 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 RPS29P19-201ENST00000479709 171 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.84□□□□□ -1.79
RFX4Q33E94 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.84□□□□□ -1.79
RFX4Q33E94 MGST2-204ENST00000506797 634 ntTSL 2 BASIC3.84□□□□□ -1.79
RFX4Q33E94 RNA5SP73-201ENST00000516744 108 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 SMARCE1P4-201ENST00000523647 241 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 OR5AN2P-201ENST00000534535 896 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
RFX4Q33E94 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC005021.1-201ENST00000608730 355 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AC239803.2-201ENST00000610161 430 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AC012409.3-201ENST00000611343 981 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC100827.5-201ENST00000615883 426 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 AC009318.3-201ENST00000616916 503 ntBASIC3.84□□□□□ -1.79
RFX4Q33E94 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.84□□□□□ -1.79
RFX4Q33E94 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.84□□□□□ -1.79
RFX4Q33E94 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
RFX4Q33E94 AC095050.2-201ENST00000510748 1458 ntBASIC3.84□□□□□ -1.8
RFX4Q33E94 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.84□□□□□ -1.8
RFX4Q33E94 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
RFX4Q33E94 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFX4Q33E94 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RFX4Q33E94 AP001486.2-201ENST00000561652 5113 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RFX4Q33E94 HMGN2P8-201ENST00000391458 268 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 NPM1P10-201ENST00000398310 865 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AL356387.2-201ENST00000422272 243 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 PPIAP17-201ENST00000438507 471 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 CACYBPP1-201ENST00000438592 684 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RFX4Q33E94 AL500522.2-201ENST00000448562 343 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 MTCO3P20-201ENST00000454926 688 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 RN7SL93P-201ENST00000463035 293 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 AC104629.2-201ENST00000468627 598 ntBASIC3.83□□□□□ -1.8
RFX4Q33E94 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.83□□□□□ -1.8
RFX4Q33E94 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.83□□□□□ -1.8
RFX4Q33E94 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.83□□□□□ -1.8
RFX4Q33E94 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.83□□□□□ -1.8
RFX4Q33E94 FABP5P6-201ENST00000510588 409 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms