Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 AC116667.1-201ENST00000604855 2072 ntBASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SHROOM1Q2M3G4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC126323.6-202ENST00000568092 3511 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC083799.1-201ENST00000366451 910 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 MIR708-201ENST00000390708 88 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 MIR1271-201ENST00000408537 86 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AP000357.1-201ENST00000409926 1165 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 MTCYBP29-201ENST00000436327 1006 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 BUD31P2-201ENST00000449374 300 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC108145.1-201ENST00000503770 153 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC010460.1-201ENST00000507087 466 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 RNU6-352P-201ENST00000516908 107 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC067805.1-201ENST00000559344 470 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 MIR4286-201ENST00000580651 93 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 AC022387.2-201ENST00000604050 448 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 BX322635.1-201ENST00000605804 496 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 MIR6500-201ENST00000622700 86 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 MIR6715B-201ENST00000637172 77 ntBASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM1Q2M3G4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 RN7SKP202-201ENST00000410439 330 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 RWDD4P2-201ENST00000426392 563 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 ABCF2P2-201ENST00000450549 296 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 RWDD4P1-201ENST00000488019 565 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AC117525.1-201ENST00000515228 503 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AC016911.1-201ENST00000613297 452 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AC107308.1-201ENST00000615897 301 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AC099669.2-201ENST00000616549 437 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AL158196.1-201ENST00000616786 434 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 USP9YP4-201ENST00000424401 1745 ntBASIC4.86□□□□□ -1.63
SHROOM1Q2M3G4 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 AC068254.2-201ENST00000623938 3577 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 MIR670-201ENST00000390142 98 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 HSPE1P12-201ENST00000412576 301 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 AC108032.1-201ENST00000416706 207 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 EIF1P3-201ENST00000423841 334 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 RPS11P1-201ENST00000451072 473 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 PPM1AP1-201ENST00000502740 1135 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 AC027281.1-201ENST00000574178 758 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 MIR4444-1-201ENST00000581696 74 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 MIR4512-201ENST00000583257 77 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 MIR4444-2-201ENST00000584390 74 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 AC022106.2-201ENST00000620114 757 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 AC019278.1-201ENST00000623516 479 ntBASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.85□□□□□ -1.63
SHROOM1Q2M3G4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms