Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGN3Q15651 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGN3Q15651 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGN3Q15651 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HMGN3Q15651 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGN3Q15651 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGN3Q15651 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGN3Q15651 MIR184-201ENST00000384962 84 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HMGN3Q15651 EI24P2-201ENST00000397776 1076 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
HMGN3Q15651 RN7SKP33-201ENST00000410942 340 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 TPT1P2-201ENST00000413105 503 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 RPL7AP73-201ENST00000413490 353 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGN3Q15651 RPL23AP38-201ENST00000423801 469 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 OR5BE1P-201ENST00000425977 939 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 DNAJC19P7-201ENST00000428811 344 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGN3Q15651 HMGB1P37-201ENST00000439613 609 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGN3Q15651 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.31□□□□□ -1.88
HMGN3Q15651 RN7SL809P-201ENST00000482040 297 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGN3Q15651 ARL2BPP6-201ENST00000512757 439 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 AL139174.1-201ENST00000531489 886 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGN3Q15651 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.31□□□□□ -1.88
HMGN3Q15651 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGN3Q15651 MIR4277-201ENST00000578298 84 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGN3Q15651 IPO5P1-202ENST00000600039 287 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGN3Q15651 AC006946.3-201ENST00000609791 756 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGN3Q15651 AP006248.2-201ENST00000623309 592 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 AC010608.2-201ENST00000624830 470 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGN3Q15651 OR5BE1P-202ENST00000641168 1176 ntBASIC3.31□□□□□ -1.88
HMGN3Q15651 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGN3Q15651 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HMGN3Q15651 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HMGN3Q15651 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
HMGN3Q15651 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGN3Q15651 AC090971.4-201ENST00000560291 1800 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGN3Q15651 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGN3Q15651 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HMGN3Q15651 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGN3Q15651 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGN3Q15651 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGN3Q15651 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGN3Q15651 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
HMGN3Q15651 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HMGN3Q15651 AC108032.1-201ENST00000416706 207 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGN3Q15651 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGN3Q15651 AC009480.2-201ENST00000422916 432 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 COX6CP15-201ENST00000426313 211 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 HIGD1AP4-201ENST00000430194 280 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
HMGN3Q15651 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGN3Q15651 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGN3Q15651 AC006539.3-201ENST00000454258 129 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HMGN3Q15651 RPL7P47-201ENST00000497299 556 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGN3Q15651 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGN3Q15651 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGN3Q15651 FTH1P9-201ENST00000513251 355 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.3□□□□□ -1.88
HMGN3Q15651 MIR4425-201ENST00000580572 84 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.3□□□□□ -1.88
HMGN3Q15651 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGN3Q15651 AC110743.1-201ENST00000584870 478 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGN3Q15651 RMST_8.1-201ENST00000610287 165 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 AC008121.2-201ENST00000614647 523 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 AC020978.9-201ENST00000624380 1141 ntBASIC3.3□□□□□ -1.88
HMGN3Q15651 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGN3Q15651 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGN3Q15651 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGN3Q15651 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGN3Q15651 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HMGN3Q15651 AC066616.2-201ENST00000559334 1481 ntBASIC3.29□□□□□ -1.88
HMGN3Q15651 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HMGN3Q15651 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGN3Q15651 AC005261.4-201ENST00000600047 1385 ntBASIC3.29□□□□□ -1.88
HMGN3Q15651 RNA5SP399-201ENST00000364003 117 ntBASIC3.29□□□□□ -1.88
HMGN3Q15651 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGN3Q15651 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
HMGN3Q15651 AL590704.1-201ENST00000402856 794 ntBASIC3.29□□□□□ -1.88
HMGN3Q15651 RPL31P12-201ENST00000422587 358 ntBASIC3.29□□□□□ -1.88
HMGN3Q15651 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGN3Q15651 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.29□□□□□ -1.88
HMGN3Q15651 USP9YP7-201ENST00000436723 430 ntBASIC3.29□□□□□ -1.88
HMGN3Q15651 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.29□□□□□ -1.88
HMGN3Q15651 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.29□□□□□ -1.88
HMGN3Q15651 RPS17P13-201ENST00000448974 407 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms