Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC096638.2-201ENST00000434965 711 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 RPS17P13-201ENST00000448974 407 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXF1Q12946 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
FOXF1Q12946 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXF1Q12946 NDUFA5P2-201ENST00000519723 344 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXF1Q12946 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXF1Q12946 AC107918.3-201ENST00000533272 382 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 TOMM20P2-201ENST00000540082 421 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.55□□□□□ -1.84
FOXF1Q12946 NPM1P47-201ENST00000560843 856 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 MIR3160-1-201ENST00000577972 85 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.55□□□□□ -1.84
FOXF1Q12946 AC020914.4-201ENST00000597690 277 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXF1Q12946 AL645927.2-201ENST00000618350 349 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
FOXF1Q12946 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.55□□□□□ -1.84
FOXF1Q12946 FAM91A3P-201ENST00000456826 2544 ntBASIC3.55□□□□□ -1.84
FOXF1Q12946 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXF1Q12946 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
FOXF1Q12946 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.55□□□□□ -1.84
FOXF1Q12946 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
FOXF1Q12946 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
FOXF1Q12946 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
FOXF1Q12946 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
FOXF1Q12946 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
FOXF1Q12946 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXF1Q12946 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
FOXF1Q12946 RNA5SP515-201ENST00000364570 118 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.54□□□□□ -1.84
FOXF1Q12946 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 OR51A6P-201ENST00000418680 1004 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.54□□□□□ -1.84
FOXF1Q12946 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.54□□□□□ -1.84
FOXF1Q12946 PPIAP17-201ENST00000438507 471 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 SNRPFP2-201ENST00000440710 251 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 RPL21P11-201ENST00000461458 483 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 AL161747.1-201ENST00000480068 358 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 RPL7P24-201ENST00000493052 752 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 AC146944.2-203ENST00000502493 354 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 AC010460.1-201ENST00000507087 466 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 AC026726.1-201ENST00000512859 601 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 AC139495.1-202ENST00000513164 354 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.54□□□□□ -1.84
FOXF1Q12946 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXF1Q12946 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.54□□□□□ -1.84
FOXF1Q12946 RN7SL703P-201ENST00000578485 302 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 AC015726.1-201ENST00000602353 681 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.54□□□□□ -1.84
FOXF1Q12946 AC025946.2-201ENST00000603398 234 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXF1Q12946 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.54□□□□□ -1.84
FOXF1Q12946 BMS1P21-201ENST00000634565 365 ntBASIC3.54□□□□□ -1.84
FOXF1Q12946 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
FOXF1Q12946 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
FOXF1Q12946 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
FOXF1Q12946 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
FOXF1Q12946 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
FOXF1Q12946 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXF1Q12946 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXF1Q12946 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXF1Q12946 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
FOXF1Q12946 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
FOXF1Q12946 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
FOXF1Q12946 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
FOXF1Q12946 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXF1Q12946 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
FOXF1Q12946 RNA5SP97-201ENST00000365006 84 ntBASIC3.53□□□□□ -1.84
FOXF1Q12946 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXF1Q12946 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
FOXF1Q12946 AC019155.1-201ENST00000382242 574 ntBASIC3.53□□□□□ -1.84
FOXF1Q12946 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
FOXF1Q12946 AL450992.3-201ENST00000413192 568 ntBASIC3.53□□□□□ -1.84
FOXF1Q12946 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.53□□□□□ -1.84
FOXF1Q12946 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.53□□□□□ -1.84
FOXF1Q12946 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.53□□□□□ -1.84
FOXF1Q12946 KCTD9P3-201ENST00000434597 1169 ntBASIC3.53□□□□□ -1.84
FOXF1Q12946 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.53□□□□□ -1.84
FOXF1Q12946 NPM1P39-201ENST00000449818 867 ntBASIC3.53□□□□□ -1.84
FOXF1Q12946 AC239798.3-201ENST00000454459 408 ntBASIC3.53□□□□□ -1.84
FOXF1Q12946 OR4A12P-201ENST00000530847 918 ntBASIC3.53□□□□□ -1.84
FOXF1Q12946 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
FOXF1Q12946 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.53□□□□□ -1.84
FOXF1Q12946 AC141257.3-201ENST00000572906 215 ntBASIC3.53□□□□□ -1.84
FOXF1Q12946 MIR4286-201ENST00000580651 93 ntBASIC3.53□□□□□ -1.84
FOXF1Q12946 AC053481.4-201ENST00000583164 216 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms