Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 TMSB4XP1-201ENST00000424567 135 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 SDCBPP1-201ENST00000440192 890 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 MTND6P13-201ENST00000443510 523 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 EEF1B2P6-201ENST00000445713 673 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 RPL31P44-201ENST00000447680 377 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 MTND6P5-201ENST00000448266 512 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.24□□□□□ -1.41
SOX4Q06945 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 FRG2FP-204ENST00000453982 852 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 SLC25A51P1-201ENST00000468432 871 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 AL355032.1-201ENST00000472981 438 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AC022215.1-201ENST00000481770 362 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX4Q06945 THAP6-203ENST00000502620 582 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.24□□□□□ -1.41
SOX4Q06945 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.24□□□□□ -1.41
SOX4Q06945 RNA5SP362-201ENST00000516048 118 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.24□□□□□ -1.41
SOX4Q06945 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 MRPS16P1-201ENST00000523462 412 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.24□□□□□ -1.41
SOX4Q06945 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 SLC2A13P1-201ENST00000531560 322 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 HMGB1P42-201ENST00000532126 553 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AC093027.1-201ENST00000546698 429 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 AL121821.2-201ENST00000556081 394 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.24□□□□□ -1.41
SOX4Q06945 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.24□□□□□ -1.41
SOX4Q06945 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.24□□□□□ -1.41
SOX4Q06945 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX4Q06945 AC112187.2-201ENST00000604345 283 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AC069304.2-201ENST00000605154 435 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AC018695.5-201ENST00000605872 315 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX4Q06945 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX4Q06945 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AC116563.2-201ENST00000624751 535 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.24□□□□□ -1.41
SOX4Q06945 MTND5P42-201ENST00000637720 498 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 AC119674.1-212ENST00000641155 993 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
SOX4Q06945 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SOX4Q06945 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
SOX4Q06945 MTCO1P11-201ENST00000429111 1528 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
SOX4Q06945 GTF2IP4-201ENST00000453092 2054 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
SOX4Q06945 AC034229.2-201ENST00000566945 2508 ntBASIC6.24□□□□□ -1.41
SOX4Q06945 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
SOX4Q06945 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX4Q06945 IMMTP1-201ENST00000435590 2219 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 HSPD1P8-201ENST00000400121 1658 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX4Q06945 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
SOX4Q06945 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX4Q06945 AC021242.1-201ENST00000507315 2035 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX4Q06945 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX4Q06945 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.23□□□□□ -1.41
SOX4Q06945 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
SOX4Q06945 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX4Q06945 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SOX4Q06945 AL161756.3-201ENST00000641216 2071 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AC007114.2-201ENST00000576014 4281 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 RNU6-666P-201ENST00000363499 107 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SOX4Q06945 Y_RNA.394-201ENST00000383942 103 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 RSU1P3-201ENST00000412878 835 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 JKAMPP1-201ENST00000413804 919 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AL596448.1-201ENST00000415024 392 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 BMS1P17-202ENST00000416720 316 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX4Q06945 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX4Q06945 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX4Q06945 AL953862.1-201ENST00000423016 168 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AC002486.1-201ENST00000435098 391 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AC009961.2-201ENST00000435771 251 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 MTCYBP6-201ENST00000441810 138 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 CALM1P1-201ENST00000442082 433 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 DNAJC19P5-201ENST00000443295 316 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX4Q06945 RPL7AP52-201ENST00000458096 790 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 KCTD9P2-201ENST00000512203 1013 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.23□□□□□ -1.41
SOX4Q06945 RNA5SP216-201ENST00000516111 123 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 RNU6-1281P-201ENST00000516223 105 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 RNU6-885P-201ENST00000516607 104 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 RNU6-1261P-201ENST00000517194 104 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AC138832.1-201ENST00000522871 556 ntBASIC6.23□□□□□ -1.41
SOX4Q06945 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.23□□□□□ -1.41
SOX4Q06945 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.23□□□□□ -1.41
SOX4Q06945 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.23□□□□□ -1.41
SOX4Q06945 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms