Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 AL590084.1-201ENST00000407885 387 ntBASIC4.52□□□□□ -1.69
LTBQ06643 RNU2-50P-201ENST00000410494 143 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.52□□□□□ -1.69
LTBQ06643 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.52□□□□□ -1.69
LTBQ06643 AC119751.6-201ENST00000416712 186 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC4.52□□□□□ -1.69
LTBQ06643 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.52□□□□□ -1.69
LTBQ06643 RPF2P1-201ENST00000424137 906 ntBASIC4.52□□□□□ -1.69
LTBQ06643 ETF1P3-201ENST00000430422 1160 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.52□□□□□ -1.69
LTBQ06643 RHOT1P3-201ENST00000436571 331 ntBASIC4.52□□□□□ -1.69
LTBQ06643 RPS29P9-201ENST00000440360 171 ntBASIC4.52□□□□□ -1.69
LTBQ06643 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.52□□□□□ -1.69
LTBQ06643 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.52□□□□□ -1.69
LTBQ06643 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.52□□□□□ -1.69
LTBQ06643 AL157827.1-201ENST00000447622 132 ntBASIC4.52□□□□□ -1.69
LTBQ06643 RBMY2TP-201ENST00000451162 947 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.52□□□□□ -1.69
LTBQ06643 RPS27AP8-201ENST00000452665 445 ntBASIC4.52□□□□□ -1.69
LTBQ06643 MTCO3P16-201ENST00000454456 754 ntBASIC4.52□□□□□ -1.69
LTBQ06643 NECAP1P2-201ENST00000455668 727 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.52□□□□□ -1.69
LTBQ06643 RNU6-599P-201ENST00000459383 107 ntBASIC4.52□□□□□ -1.69
LTBQ06643 RNU6-1193P-201ENST00000459461 107 ntBASIC4.52□□□□□ -1.69
LTBQ06643 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.52□□□□□ -1.69
LTBQ06643 MTND4LP3-201ENST00000468320 276 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.52□□□□□ -1.69
LTBQ06643 AC023050.1-201ENST00000498198 304 ntBASIC4.52□□□□□ -1.69
LTBQ06643 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.52□□□□□ -1.69
LTBQ06643 AC111000.2-201ENST00000507775 550 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.52□□□□□ -1.69
LTBQ06643 MTCO1P49-201ENST00000523429 802 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.52□□□□□ -1.69
LTBQ06643 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
LTBQ06643 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.52□□□□□ -1.69
LTBQ06643 SETP1-201ENST00000556014 845 ntBASIC4.52□□□□□ -1.69
LTBQ06643 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.52□□□□□ -1.69
LTBQ06643 AC090695.1-201ENST00000561269 1222 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.52□□□□□ -1.69
LTBQ06643 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.52□□□□□ -1.69
LTBQ06643 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.52□□□□□ -1.69
LTBQ06643 AC011447.4-201ENST00000587562 111 ntBASIC4.52□□□□□ -1.69
LTBQ06643 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.52□□□□□ -1.69
LTBQ06643 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.52□□□□□ -1.69
LTBQ06643 AL583856.2-201ENST00000606298 543 ntBASIC4.52□□□□□ -1.69
LTBQ06643 OR2AS2P-201ENST00000606902 342 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AC013468.1-201ENST00000608680 598 ntBASIC4.52□□□□□ -1.69
LTBQ06643 HULC.1-201ENST00000612720 240 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AL627230.1-201ENST00000613077 211 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AL591926.8-201ENST00000616876 211 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AL158163.2-201ENST00000619110 700 ntBASIC4.52□□□□□ -1.69
LTBQ06643 RNU6-368P-201ENST00000620928 107 ntBASIC4.52□□□□□ -1.69
LTBQ06643 RNU6-538P-201ENST00000622329 107 ntBASIC4.52□□□□□ -1.69
LTBQ06643 AC092159.4-201ENST00000624944 550 ntBASIC4.52□□□□□ -1.69
LTBQ06643 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.52□□□□□ -1.69
LTBQ06643 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LTBQ06643 ELL2P3-201ENST00000457883 1602 ntBASIC4.52□□□□□ -1.69
LTBQ06643 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 RLIMP2-201ENST00000427891 1563 ntBASIC4.52□□□□□ -1.69
LTBQ06643 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LTBQ06643 AC006484.1-201ENST00000435086 1884 ntBASIC4.52□□□□□ -1.69
LTBQ06643 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.51□□□□□ -1.69
LTBQ06643 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.51□□□□□ -1.69
LTBQ06643 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 AC093591.2-201ENST00000565254 3843 ntBASIC4.51□□□□□ -1.69
LTBQ06643 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 AC100871.1-201ENST00000507871 1456 ntBASIC4.51□□□□□ -1.69
LTBQ06643 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.51□□□□□ -1.69
LTBQ06643 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.51□□□□□ -1.69
LTBQ06643 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LTBQ06643 RNU4-24P-201ENST00000364565 139 ntBASIC4.51□□□□□ -1.69
LTBQ06643 RNA5SP505-201ENST00000364748 108 ntBASIC4.51□□□□□ -1.69
LTBQ06643 SNORA70.10-201ENST00000384515 134 ntBASIC4.51□□□□□ -1.69
LTBQ06643 RNU6-1263P-201ENST00000384601 106 ntBASIC4.51□□□□□ -1.69
LTBQ06643 RNA5SP105-201ENST00000391123 113 ntBASIC4.51□□□□□ -1.69
LTBQ06643 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.51□□□□□ -1.69
LTBQ06643 CYP4F29P-201ENST00000420685 446 ntBASIC4.51□□□□□ -1.69
LTBQ06643 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.51□□□□□ -1.69
LTBQ06643 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.51□□□□□ -1.69
LTBQ06643 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.51□□□□□ -1.69
LTBQ06643 MUPP-201ENST00000438111 566 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms