Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.16□□□□□ -1.9
HIST1H1AQ02539 AC063949.1-201ENST00000552900 865 ntBASIC3.16□□□□□ -1.9
HIST1H1AQ02539 TVP23BP1-201ENST00000557500 617 ntBASIC3.16□□□□□ -1.9
HIST1H1AQ02539 AC110743.1-201ENST00000584870 478 ntBASIC3.16□□□□□ -1.9
HIST1H1AQ02539 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.16□□□□□ -1.9
HIST1H1AQ02539 AC128687.2-201ENST00000609657 566 ntBASIC3.16□□□□□ -1.9
HIST1H1AQ02539 AC096586.2-201ENST00000610260 441 ntBASIC3.16□□□□□ -1.9
HIST1H1AQ02539 AC064801.1-201ENST00000612025 407 ntBASIC3.16□□□□□ -1.9
HIST1H1AQ02539 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.16□□□□□ -1.9
HIST1H1AQ02539 AP005264.7-201ENST00000625003 745 ntBASIC3.16□□□□□ -1.9
HIST1H1AQ02539 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.16□□□□□ -1.9
HIST1H1AQ02539 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HIST1H1AQ02539 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HIST1H1AQ02539 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HIST1H1AQ02539 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.16□□□□□ -1.9
HIST1H1AQ02539 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HIST1H1AQ02539 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HIST1H1AQ02539 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.9
HIST1H1AQ02539 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
HIST1H1AQ02539 AL132640.2-201ENST00000559968 1698 ntBASIC3.15□□□□□ -1.9
HIST1H1AQ02539 IGKV7-3-201ENST00000357453 298 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 U1.1-201ENST00000384101 164 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 RNU6-398P-201ENST00000384143 109 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AL590139.1-201ENST00000416267 400 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 LYPLA1P1-201ENST00000434514 622 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AL162151.2-201ENST00000448875 158 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 NDUFA12P1-201ENST00000455914 406 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 RNU6-1218P-201ENST00000458990 108 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 RN7SL738P-201ENST00000470264 297 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 RPS27AP16-201ENST00000492222 470 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AL445363.3-201ENST00000623080 671 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC008013.2-202ENST00000637965 364 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AL353746.1-201ENST00000566293 6881 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 AC025125.1-201ENST00000624743 1922 ntBASIC3.15□□□□□ -1.91
HIST1H1AQ02539 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HIST1H1AQ02539 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 CASC19-284ENST00000642142 1868 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 SYT14P1-202ENST00000600441 1448 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 RNU6-225P-201ENST00000384613 103 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 RPL23AP59-201ENST00000399415 461 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 P2RY10P2-201ENST00000416730 913 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 ATP5HP2-201ENST00000433885 485 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 RPS3AP54-201ENST00000435535 734 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 Z95152.1-201ENST00000453556 656 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 TVP23BP2-201ENST00000455082 615 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 RPL23AP24-201ENST00000458203 385 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 RPL7P48-201ENST00000461513 746 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 RPS20P4-201ENST00000461659 355 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AP000873.1-201ENST00000463987 400 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC010683.1-201ENST00000473673 378 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AL049830.2-201ENST00000480072 201 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 TRBV8-1-201ENST00000481590 279 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AF213884.1-201ENST00000488102 463 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 HAUS1P1-201ENST00000505275 832 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 SNX5P1-201ENST00000505757 1041 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 RNA5SP519-201ENST00000516480 119 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 IGKV2-38-201ENST00000517443 247 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HIST1H1AQ02539 NPM1P35-201ENST00000533043 868 ntBASIC3.14□□□□□ -1.91
HIST1H1AQ02539 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms