Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC097505.1-201ENST00000610199 565 ntBASIC4.76□□□□□ -1.65
RAE1P78406 AC138965.3-201ENST00000623875 498 ntBASIC4.76□□□□□ -1.65
RAE1P78406 MIR4302-201ENST00000638058 60 ntBASIC4.76□□□□□ -1.65
RAE1P78406 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RAE1P78406 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.76□□□□□ -1.65
RAE1P78406 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 AC092079.1-201ENST00000558620 1985 ntBASIC4.76□□□□□ -1.65
RAE1P78406 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.76□□□□□ -1.65
RAE1P78406 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
RAE1P78406 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.75□□□□□ -1.65
RAE1P78406 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
RAE1P78406 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 AC000374.1-201ENST00000434698 1745 ntBASIC4.75□□□□□ -1.65
RAE1P78406 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 SNURFL-201ENST00000309296 343 ntBASIC4.75□□□□□ -1.65
RAE1P78406 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RAE1P78406 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 RN7SKP149-201ENST00000363008 344 ntBASIC4.75□□□□□ -1.65
RAE1P78406 RNU5D-1-201ENST00000363299 116 ntBASIC4.75□□□□□ -1.65
RAE1P78406 RNA5SP435-201ENST00000364044 108 ntBASIC4.75□□□□□ -1.65
RAE1P78406 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 AL021407.1-201ENST00000404531 386 ntBASIC4.75□□□□□ -1.65
RAE1P78406 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.75□□□□□ -1.65
RAE1P78406 HNRNPDP2-201ENST00000406475 478 ntBASIC4.75□□□□□ -1.65
RAE1P78406 U3.36-201ENST00000408418 213 ntBASIC4.75□□□□□ -1.65
RAE1P78406 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 AC007559.1-201ENST00000428736 355 ntBASIC4.75□□□□□ -1.65
RAE1P78406 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 THAP5P1-201ENST00000439089 262 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AL591503.2-201ENST00000442314 1005 ntBASIC4.75□□□□□ -1.65
RAE1P78406 MTCO2P7-201ENST00000446518 666 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 MTND1P16-201ENST00000465177 898 ntBASIC4.75□□□□□ -1.65
RAE1P78406 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 RPL30P6-201ENST00000475925 342 ntBASIC4.75□□□□□ -1.65
RAE1P78406 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.75□□□□□ -1.65
RAE1P78406 HMGN2P25-201ENST00000486956 268 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 AC008885.2-201ENST00000509506 930 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 ENPP7P9-201ENST00000514456 627 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC117532.1-201ENST00000514638 323 ntBASIC4.75□□□□□ -1.65
RAE1P78406 RNA5SP43-201ENST00000516559 110 ntBASIC4.75□□□□□ -1.65
RAE1P78406 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.75□□□□□ -1.65
RAE1P78406 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 AC004217.3-201ENST00000551552 878 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC068714.1-201ENST00000559623 800 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC018552.1-201ENST00000562099 811 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.75□□□□□ -1.65
RAE1P78406 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 AC104687.2-201ENST00000604442 342 ntBASIC4.75□□□□□ -1.65
RAE1P78406 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC010738.1-201ENST00000604970 987 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC135507.1-201ENST00000607214 561 ntBASIC4.75□□□□□ -1.65
RAE1P78406 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 MIR6768-201ENST00000610734 72 ntBASIC4.75□□□□□ -1.65
RAE1P78406 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.75□□□□□ -1.65
RAE1P78406 AC124312.6-202ENST00000623624 418 ntBASIC4.75□□□□□ -1.65
RAE1P78406 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.75□□□□□ -1.65
RAE1P78406 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.75□□□□□ -1.65
RAE1P78406 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.75□□□□□ -1.65
RAE1P78406 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.75□□□□□ -1.65
RAE1P78406 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RAE1P78406 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RAE1P78406 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
RAE1P78406 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.74□□□□□ -1.65
RAE1P78406 AC010329.2-201ENST00000595195 2737 ntBASIC4.74□□□□□ -1.65
RAE1P78406 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAE1P78406 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
RAE1P78406 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
RAE1P78406 AL512646.1-201ENST00000269395 1077 ntBASIC4.74□□□□□ -1.65
RAE1P78406 SNORA73.1-201ENST00000363107 205 ntBASIC4.74□□□□□ -1.65
RAE1P78406 Y_RNA.311-201ENST00000365068 96 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms