Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 AF287957.1-201ENST00000607368 1595 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 GNG5P1-201ENST00000255500 204 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
GFRA1P56159 OR9K1P-201ENST00000326513 941 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 RNU6-797P-201ENST00000363101 109 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 U8.3-201ENST00000363321 132 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 SNORA72.1-201ENST00000363485 129 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 ARF4P3-201ENST00000397387 509 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 CALM2P3-201ENST00000400429 449 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 FGF7P8-201ENST00000402994 292 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 SNORA11.3-201ENST00000408471 128 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 HMGN1P20-201ENST00000411849 300 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 RPS3AP9-201ENST00000417027 792 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 PIGFP2-201ENST00000421400 651 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
GFRA1P56159 USP9YP36-201ENST00000424581 829 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.43□□□□□ -1.54
GFRA1P56159 FCF1P1-201ENST00000432690 571 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 AC004980.3-201ENST00000447046 365 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 AC002381.1-201ENST00000447049 280 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 GEMIN2P1-201ENST00000454246 752 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 RN7SL352P-201ENST00000466002 277 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.43□□□□□ -1.54
GFRA1P56159 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.43□□□□□ -1.54
GFRA1P56159 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 OR5M14P-201ENST00000506803 618 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 AC006390.1-201ENST00000508068 283 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 GAPDHP62-201ENST00000515313 990 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 RNA5SP438-201ENST00000516561 112 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
GFRA1P56159 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 AC022861.1-201ENST00000522981 663 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.43□□□□□ -1.54
GFRA1P56159 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 AC034268.2-201ENST00000571784 482 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 MIR4719-201ENST00000585233 84 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 HMGN1P30-201ENST00000589286 268 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.43□□□□□ -1.54
GFRA1P56159 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 AC063977.5-201ENST00000601044 974 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 SUGT1P3-202ENST00000604259 383 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
GFRA1P56159 AC002553.4-201ENST00000616896 331 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 AC009237.17-201ENST00000618111 748 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 SNORA11.6-201ENST00000619030 128 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 DUXAP9-208ENST00000622815 614 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.43□□□□□ -1.54
GFRA1P56159 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.43□□□□□ -1.54
GFRA1P56159 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
GFRA1P56159 HSPD1P8-201ENST00000400121 1658 ntBASIC5.43□□□□□ -1.54
GFRA1P56159 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 AL034546.1-201ENST00000623740 3693 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
GFRA1P56159 AC007159.1-201ENST00000566529 4706 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.42□□□□□ -1.54
GFRA1P56159 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.42□□□□□ -1.54
GFRA1P56159 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
GFRA1P56159 OR10R3P-201ENST00000361688 942 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC016769.3-201ENST00000396562 315 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA1P56159 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA1P56159 BX284632.2-201ENST00000421091 399 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 NMD3P2-201ENST00000421815 761 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.42□□□□□ -1.54
GFRA1P56159 AC073464.1-201ENST00000429823 534 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 RPEP2-201ENST00000432149 701 ntBASIC5.42□□□□□ -1.54
GFRA1P56159 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms