Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 MTND4LP3-201ENST00000468320 276 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 RN7SL174P-201ENST00000475578 289 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AC072039.1-201ENST00000477611 581 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 MTCYBP17-201ENST00000503579 789 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 DSTNP2-201ENST00000504533 515 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 SNX5P1-201ENST00000505757 1041 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SUMO3P55854 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.91□□□□□ -1.62
SUMO3P55854 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.91□□□□□ -1.62
SUMO3P55854 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.91□□□□□ -1.62
SUMO3P55854 SNORD95-201ENST00000579879 68 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AC011445.2-201ENST00000599274 173 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AL031985.2-201ENST00000600955 480 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AP000769.2-201ENST00000602344 396 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AF131215.7-201ENST00000602443 707 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 WISP1-OT1-201ENST00000602893 642 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 SUGT1P3-202ENST00000604259 383 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AP000894.4-201ENST00000610185 483 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 SNORA11.6-201ENST00000619030 128 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.91□□□□□ -1.62
SUMO3P55854 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.91□□□□□ -1.62
SUMO3P55854 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.91□□□□□ -1.62
SUMO3P55854 MIR4302-201ENST00000638058 60 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 AC104964.3-201ENST00000606115 2860 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
SUMO3P55854 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 AC235565.1-201ENST00000456962 1325 ntBASIC4.91□□□□□ -1.62
SUMO3P55854 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SUMO3P55854 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.91□□□□□ -1.62
SUMO3P55854 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
SUMO3P55854 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SUMO3P55854 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.9□□□□□ -1.62
SUMO3P55854 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SUMO3P55854 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SUMO3P55854 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SUMO3P55854 AC073429.2-201ENST00000569694 1444 ntBASIC4.9□□□□□ -1.62
SUMO3P55854 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
SUMO3P55854 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SUMO3P55854 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SUMO3P55854 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 RNU1-19P-201ENST00000363306 165 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 Y_RNA.201-201ENST00000364052 96 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 RN7SKP153-201ENST00000365026 316 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 RPS3AP26-201ENST00000398259 784 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 OR3A2-201ENST00000408891 1076 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 GPS2P1-201ENST00000411761 986 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 TMBIM7P-201ENST00000418074 855 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 RPL7AP49-201ENST00000429522 581 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC124944.2-201ENST00000429866 1242 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 MTND1P20-201ENST00000430341 950 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.9□□□□□ -1.63
SUMO3P55854 AL591438.1-201ENST00000433508 581 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC129850.1-201ENST00000436203 508 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.9□□□□□ -1.63
SUMO3P55854 MTND4P6-201ENST00000438297 472 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AL391987.1-201ENST00000441025 200 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 AL591623.2-201ENST00000449978 222 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.9□□□□□ -1.63
SUMO3P55854 TRGVB-201ENST00000453257 471 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AL133445.1-201ENST00000467051 452 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC087879.1-201ENST00000474343 374 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 HMGN2P25-201ENST00000486956 268 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC005726.1-201ENST00000494679 427 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.9□□□□□ -1.63
SUMO3P55854 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.9□□□□□ -1.63
SUMO3P55854 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.9□□□□□ -1.63
SUMO3P55854 AC239860.2-201ENST00000525886 270 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 DEFB131D-201ENST00000526803 184 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 ZNF705CP-201ENST00000530515 889 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SUMO3P55854 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.9□□□□□ -1.63
SUMO3P55854 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.9□□□□□ -1.63
SUMO3P55854 AL121766.1-201ENST00000547436 487 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 LSM6P2-201ENST00000552208 177 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.9□□□□□ -1.63
SUMO3P55854 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.9□□□□□ -1.63
SUMO3P55854 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.9□□□□□ -1.63
SUMO3P55854 ACTR3BP3-201ENST00000565577 979 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 MTCYBP28-201ENST00000566728 1132 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC012435.1-202ENST00000568772 240 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 MIR4504-201ENST00000577413 92 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.9□□□□□ -1.63
SUMO3P55854 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.9□□□□□ -1.63
SUMO3P55854 AC011477.5-201ENST00000586571 259 ntBASIC4.9□□□□□ -1.63
SUMO3P55854 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms