Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKNOX1P55347 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PKNOX1P55347 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PKNOX1P55347 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.04□□□□□ -1.76
PKNOX1P55347 PGBD4P8-201ENST00000412993 562 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.04□□□□□ -1.76
PKNOX1P55347 YY1P1-201ENST00000427625 668 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.04□□□□□ -1.76
PKNOX1P55347 AL772161.1-201ENST00000439130 476 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.04□□□□□ -1.76
PKNOX1P55347 AC092691.2-201ENST00000461787 803 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 PPIAP21-201ENST00000464473 501 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 KCTD9P2-201ENST00000512203 1013 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 RNA5SP49-201ENST00000516450 115 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 AC010476.1-201ENST00000519111 851 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKNOX1P55347 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.04□□□□□ -1.76
PKNOX1P55347 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKNOX1P55347 AC135001.1-201ENST00000544546 283 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.04□□□□□ -1.76
PKNOX1P55347 AC084757.1-201ENST00000559987 490 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.04□□□□□ -1.76
PKNOX1P55347 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.04□□□□□ -1.76
PKNOX1P55347 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PKNOX1P55347 AC005229.3-201ENST00000603438 323 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 AC005191.1-201ENST00000603950 358 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 AC104662.1-201ENST00000604448 511 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.04□□□□□ -1.76
PKNOX1P55347 AC100814.1-201ENST00000606963 623 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.04□□□□□ -1.76
PKNOX1P55347 AC100827.5-201ENST00000615883 426 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.04□□□□□ -1.76
PKNOX1P55347 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.04□□□□□ -1.76
PKNOX1P55347 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.04□□□□□ -1.76
PKNOX1P55347 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PKNOX1P55347 AC017002.4-201ENST00000604721 1525 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
PKNOX1P55347 ERCC6-202ENST00000374127 1782 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.04□□□□□ -1.76
PKNOX1P55347 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.04□□□□□ -1.76
PKNOX1P55347 AC114546.3-201ENST00000623582 1734 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 CYP1D1P-201ENST00000416662 1433 ntBASIC4.04□□□□□ -1.76
PKNOX1P55347 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PKNOX1P55347 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AL049555.1-201ENST00000562834 1933 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKNOX1P55347 AC022893.2-201ENST00000564832 3296 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKNOX1P55347 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.03□□□□□ -1.76
PKNOX1P55347 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKNOX1P55347 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKNOX1P55347 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKNOX1P55347 RNU4-39P-201ENST00000362455 127 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 SNORA58B-201ENST00000364259 136 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PKNOX1P55347 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PKNOX1P55347 RNU6-40P-201ENST00000384254 107 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AL589655.1-201ENST00000405398 482 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.03□□□□□ -1.76
PKNOX1P55347 RBMY2KP-201ENST00000418221 992 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.03□□□□□ -1.76
PKNOX1P55347 DPY19L1P2-201ENST00000426647 915 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 MTCO1P54-201ENST00000430139 712 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.03□□□□□ -1.76
PKNOX1P55347 MTCYBP12-201ENST00000440559 1134 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.03□□□□□ -1.76
PKNOX1P55347 IFNWP4-201ENST00000453148 294 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AC005229.2-201ENST00000456995 399 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 S100A11P1-201ENST00000477525 312 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AC069499.1-201ENST00000489433 509 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AC005912.1-201ENST00000495392 255 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.03□□□□□ -1.76
PKNOX1P55347 RNA5SP519-201ENST00000516480 119 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AC105233.3-201ENST00000531125 744 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 TRAV8-5-201ENST00000537369 341 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AC107016.1-201ENST00000550463 337 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.03□□□□□ -1.76
PKNOX1P55347 NPM1P47-201ENST00000560843 856 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.03□□□□□ -1.76
PKNOX1P55347 AC020914.4-201ENST00000597690 277 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 MTCO3P22-201ENST00000603219 784 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 PSMA6P4-201ENST00000603247 718 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 HMGB1P50-201ENST00000605814 607 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AC012557.1-201ENST00000607115 611 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AC015802.5-201ENST00000607478 399 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AC128687.2-201ENST00000609657 566 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 AC019193.2-201ENST00000610012 634 ntBASIC4.03□□□□□ -1.76
PKNOX1P55347 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.03□□□□□ -1.76
PKNOX1P55347 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PKNOX1P55347 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.03□□□□□ -1.76
PKNOX1P55347 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.03□□□□□ -1.76
PKNOX1P55347 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms