Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC091042.1-201ENST00000579213 173 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH11P55287 uc_338.9-201ENST00000617424 182 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.28□□□□□ -1.72
CDH11P55287 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC006963.1-201ENST00000624003 1052 ntBASIC4.28□□□□□ -1.72
CDH11P55287 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
CDH11P55287 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.28□□□□□ -1.72
CDH11P55287 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDH11P55287 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CDH11P55287 TLK1P1-201ENST00000456760 2440 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC006042.3-201ENST00000454684 1469 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC012618.3-205ENST00000637896 1496 ntBASIC4.27□□□□□ -1.73
CDH11P55287 OR56B2P-201ENST00000317102 954 ntBASIC4.27□□□□□ -1.73
CDH11P55287 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.27□□□□□ -1.73
CDH11P55287 RNU6-353P-201ENST00000364266 108 ntBASIC4.27□□□□□ -1.73
CDH11P55287 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 RPL7P27-201ENST00000403775 720 ntBASIC4.27□□□□□ -1.73
CDH11P55287 MTATP6P20-201ENST00000414147 562 ntBASIC4.27□□□□□ -1.73
CDH11P55287 RPS7P9-201ENST00000414704 586 ntBASIC4.27□□□□□ -1.73
CDH11P55287 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH11P55287 AL449283.1-202ENST00000418249 604 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC027644.1-201ENST00000419595 298 ntBASIC4.27□□□□□ -1.73
CDH11P55287 NANOGP5-201ENST00000424456 877 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH11P55287 AC007559.1-201ENST00000428736 355 ntBASIC4.27□□□□□ -1.73
CDH11P55287 HMGB3P5-201ENST00000428894 612 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH11P55287 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH11P55287 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH11P55287 AC092170.1-201ENST00000440211 356 ntBASIC4.27□□□□□ -1.73
CDH11P55287 H2AFZP6-201ENST00000444403 394 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC244505.3-201ENST00000454598 187 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC006463.2-201ENST00000473326 348 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC134050.1-201ENST00000495088 933 ntBASIC4.27□□□□□ -1.73
CDH11P55287 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH11P55287 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH11P55287 HMGB3P13-201ENST00000511263 607 ntBASIC4.27□□□□□ -1.73
CDH11P55287 PRELID3BP4-201ENST00000515476 571 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC134698.5-201ENST00000519444 336 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AC104417.1-201ENST00000523974 751 ntBASIC4.27□□□□□ -1.73
CDH11P55287 NDUFS5P6-201ENST00000529136 295 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH11P55287 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH11P55287 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH11P55287 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH11P55287 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.27□□□□□ -1.73
CDH11P55287 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH11P55287 AC015912.2-201ENST00000571053 181 ntBASIC4.27□□□□□ -1.73
CDH11P55287 MTATP6P24-201ENST00000576835 677 ntBASIC4.27□□□□□ -1.73
CDH11P55287 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH11P55287 AL512782.1-201ENST00000603093 364 ntBASIC4.27□□□□□ -1.73
CDH11P55287 Z82195.1-201ENST00000604558 398 ntBASIC4.27□□□□□ -1.73
CDH11P55287 RN7SL722P-201ENST00000617780 284 ntBASIC4.27□□□□□ -1.73
CDH11P55287 RN7SL565P-201ENST00000618246 284 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AP003497.2-201ENST00000624220 967 ntBASIC4.27□□□□□ -1.73
CDH11P55287 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH11P55287 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.27□□□□□ -1.73
CDH11P55287 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.27□□□□□ -1.73
CDH11P55287 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDH11P55287 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDH11P55287 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 RNF6P1-201ENST00000444889 1784 ntBASIC4.27□□□□□ -1.73
CDH11P55287 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDH11P55287 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
CDH11P55287 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH11P55287 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH11P55287 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 AL137100.1-201ENST00000556703 1620 ntBASIC4.26□□□□□ -1.73
CDH11P55287 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDH11P55287 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CDH11P55287 MIR192-201ENST00000384915 110 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.26□□□□□ -1.73
CDH11P55287 RNA5SP113-201ENST00000410486 84 ntBASIC4.26□□□□□ -1.73
CDH11P55287 RNU2-50P-201ENST00000410494 143 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC092745.2-202ENST00000411880 369 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AL592310.1-201ENST00000414330 671 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.26□□□□□ -1.73
CDH11P55287 RPL26P29-201ENST00000415623 438 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH11P55287 LINC00993-201ENST00000420453 540 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AP001324.1-201ENST00000428553 399 ntBASIC4.26□□□□□ -1.73
CDH11P55287 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.26□□□□□ -1.73
CDH11P55287 GTF2IP3-201ENST00000433887 494 ntBASIC4.26□□□□□ -1.73
CDH11P55287 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms