Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 MIR7-3-201ENST00000384898 110 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 HMGB3P19-201ENST00000403971 560 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 PGBD4P8-201ENST00000412993 562 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGCS2P54868 PRELID3BP10-201ENST00000431957 584 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS2P54868 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS2P54868 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AC026403.1-201ENST00000518938 295 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS2P54868 MTND1P6-201ENST00000523621 946 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 AP000619.3-201ENST00000535634 1127 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AL049874.4-201ENST00000557593 255 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 AC084759.1-201ENST00000561168 290 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 AC009268.1-201ENST00000561352 1203 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS2P54868 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGCS2P54868 AL021368.1-201ENST00000607490 540 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS2P54868 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS2P54868 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS2P54868 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS2P54868 AC020978.9-201ENST00000624380 1141 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 AL034408.1-202ENST00000636088 415 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 AC009093.8-201ENST00000641769 292 ntBASIC4.63□□□□□ -1.67
HMGCS2P54868 TCP1P3-201ENST00000414406 1498 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AC024560.2-201ENST00000507981 1497 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS2P54868 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGCS2P54868 AC126323.6-202ENST00000568092 3511 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HMGCS2P54868 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGCS2P54868 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS2P54868 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS2P54868 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
HMGCS2P54868 RNU1-15P-201ENST00000353977 144 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 SNORA5A-201ENST00000384111 134 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 RPS23P10-201ENST00000416185 486 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGCS2P54868 FAM204CP-201ENST00000424489 642 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.62□□□□□ -1.67
HMGCS2P54868 OR4F13P-201ENST00000428478 931 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGCS2P54868 TRIM60P13-201ENST00000432350 1283 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 PTMAP3-201ENST00000447474 330 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGCS2P54868 RPS3AP6-201ENST00000484430 795 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.62□□□□□ -1.67
HMGCS2P54868 AC026726.1-201ENST00000512859 601 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGCS2P54868 RNU6-513P-201ENST00000516104 104 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGCS2P54868 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGCS2P54868 AC090312.1-201ENST00000580637 348 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.62□□□□□ -1.67
HMGCS2P54868 AC012468.1-201ENST00000604888 430 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGCS2P54868 AC005972.3-201ENST00000606304 481 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AC012467.1-201ENST00000607740 256 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AL354696.1-201ENST00000614652 497 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AC012314.7-201ENST00000619693 93 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AP001005.3-201ENST00000622049 129 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AC138907.10-201ENST00000623708 983 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AC073530.2-201ENST00000623987 261 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AC067931.1-201ENST00000624190 671 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 AP005264.7-201ENST00000625003 745 ntBASIC4.62□□□□□ -1.67
HMGCS2P54868 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGCS2P54868 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
HMGCS2P54868 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HMGCS2P54868 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
HMGCS2P54868 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS2P54868 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGCS2P54868 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS2P54868 AL589826.1-201ENST00000340697 249 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGCS2P54868 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGCS2P54868 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS2P54868 AC104306.1-201ENST00000449702 371 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 RAD23BP3-201ENST00000454157 1152 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.61□□□□□ -1.67
HMGCS2P54868 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.61□□□□□ -1.67
HMGCS2P54868 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGCS2P54868 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGCS2P54868 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGCS2P54868 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.61□□□□□ -1.67
HMGCS2P54868 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGCS2P54868 GTF2IP22-201ENST00000554443 182 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGCS2P54868 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGCS2P54868 SLC25A36P1-201ENST00000590111 465 ntBASIC4.61□□□□□ -1.67
HMGCS2P54868 FAM60CP-201ENST00000591086 664 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms