Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.22□□□□□ -1.57
COPAP53621 AGGF1P6-201ENST00000569213 976 ntBASIC5.22□□□□□ -1.57
COPAP53621 MIR4716-201ENST00000579628 84 ntBASIC5.22□□□□□ -1.57
COPAP53621 AC004223.2-201ENST00000590309 544 ntBASIC5.22□□□□□ -1.57
COPAP53621 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.22□□□□□ -1.57
COPAP53621 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.22□□□□□ -1.57
COPAP53621 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.22□□□□□ -1.57
COPAP53621 TUSC7.1-201ENST00000610969 165 ntBASIC5.22□□□□□ -1.57
COPAP53621 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
COPAP53621 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.22□□□□□ -1.57
COPAP53621 AC018926.3-201ENST00000618841 406 ntBASIC5.22□□□□□ -1.57
COPAP53621 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.22□□□□□ -1.57
COPAP53621 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.22□□□□□ -1.57
COPAP53621 AC073869.10-201ENST00000642016 354 ntBASIC5.22□□□□□ -1.57
COPAP53621 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
COPAP53621 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPAP53621 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.22□□□□□ -1.57
COPAP53621 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
COPAP53621 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.22□□□□□ -1.57
COPAP53621 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
COPAP53621 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COPAP53621 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
COPAP53621 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COPAP53621 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 AC119744.1-201ENST00000454746 1715 ntBASIC5.21□□□□□ -1.58
COPAP53621 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 RN7SKP153-201ENST00000365026 316 ntBASIC5.21□□□□□ -1.58
COPAP53621 SNORD116-2-201ENST00000384274 95 ntBASIC5.21□□□□□ -1.58
COPAP53621 SNORD116-6-201ENST00000384711 96 ntBASIC5.21□□□□□ -1.58
COPAP53621 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 RN7SKP114-201ENST00000410327 279 ntBASIC5.21□□□□□ -1.58
COPAP53621 AL008987.1-201ENST00000415528 237 ntBASIC5.21□□□□□ -1.58
COPAP53621 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.21□□□□□ -1.58
COPAP53621 AC234782.4-201ENST00000417646 1048 ntBASIC5.21□□□□□ -1.58
COPAP53621 ELOCP9-201ENST00000418624 239 ntBASIC5.21□□□□□ -1.58
COPAP53621 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.21□□□□□ -1.58
COPAP53621 AL365338.1-201ENST00000422282 858 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC009965.2-201ENST00000425328 970 ntBASIC5.21□□□□□ -1.58
COPAP53621 CNOT7P1-201ENST00000429006 852 ntBASIC5.21□□□□□ -1.58
COPAP53621 MTCO1P3-201ENST00000429327 192 ntBASIC5.21□□□□□ -1.58
COPAP53621 TXNP5-201ENST00000441043 315 ntBASIC5.21□□□□□ -1.58
COPAP53621 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.21□□□□□ -1.58
COPAP53621 NOP56P2-201ENST00000447491 769 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC239809.1-201ENST00000450470 217 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.21□□□□□ -1.58
COPAP53621 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.21□□□□□ -1.58
COPAP53621 AC108161.1-201ENST00000461060 402 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.21□□□□□ -1.58
COPAP53621 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 AC105313.1-201ENST00000509121 353 ntBASIC5.21□□□□□ -1.58
COPAP53621 RN7SKP260-201ENST00000516907 149 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.21□□□□□ -1.58
COPAP53621 AC007834.2-201ENST00000536310 343 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.21□□□□□ -1.58
COPAP53621 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 OSBPL9P5-201ENST00000542581 171 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC008033.2-201ENST00000542626 177 ntBASIC5.21□□□□□ -1.58
COPAP53621 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC5.21□□□□□ -1.58
COPAP53621 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 BPTFP1-201ENST00000579209 492 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.21□□□□□ -1.58
COPAP53621 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.21□□□□□ -1.58
COPAP53621 MIR6820-201ENST00000611508 62 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.21□□□□□ -1.58
COPAP53621 AP000648.2-201ENST00000624182 404 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC116563.2-201ENST00000624751 535 ntBASIC5.21□□□□□ -1.58
COPAP53621 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
COPAP53621 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.21□□□□□ -1.58
COPAP53621 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
COPAP53621 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
COPAP53621 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 SGO1P1-201ENST00000603525 1447 ntBASIC5.21□□□□□ -1.58
COPAP53621 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.21□□□□□ -1.58
COPAP53621 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.21□□□□□ -1.58
COPAP53621 AL022393.1-201ENST00000625142 1677 ntBASIC5.21□□□□□ -1.58
COPAP53621 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
COPAP53621 AL672167.1-204ENST00000641875 3017 ntBASIC5.21□□□□□ -1.58
COPAP53621 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COPAP53621 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COPAP53621 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.2□□□□□ -1.58
COPAP53621 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COPAP53621 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COPAP53621 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COPAP53621 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.2□□□□□ -1.58
COPAP53621 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.2□□□□□ -1.58
COPAP53621 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.2□□□□□ -1.58
COPAP53621 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.2□□□□□ -1.58
COPAP53621 SNORD116.1-201ENST00000365628 92 ntBASIC5.2□□□□□ -1.58
COPAP53621 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
COPAP53621 MIR16-1-201ENST00000385271 89 ntBASIC5.2□□□□□ -1.58
COPAP53621 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
COPAP53621 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms