Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
RNF144AP50876 Y_RNA.482-201ENST00000384377 111 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 RNU6-903P-201ENST00000391270 109 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 SSXP10-201ENST00000402595 565 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 RNU2-6P-201ENST00000411404 190 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF144AP50876 DPH3P2-201ENST00000422618 250 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 CHIAP3-201ENST00000423668 1133 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 AC096632.1-201ENST00000427395 310 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 AC093151.1-201ENST00000427711 313 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 RPL7L1P10-201ENST00000427790 463 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 AC010881.1-201ENST00000433830 235 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 ANXA2P2-201ENST00000435128 1020 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 AL604028.2-201ENST00000437848 788 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 AC239800.1-201ENST00000442049 719 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 GAPDHP53-201ENST00000458397 924 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 RPL7L1P8-201ENST00000469911 741 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 RPL23AP11-201ENST00000475260 469 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 TRBV1-201ENST00000476502 284 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF144AP50876 MTND6P8-201ENST00000503471 522 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF144AP50876 SCARNA6-201ENST00000515982 265 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF144AP50876 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF144AP50876 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF144AP50876 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF144AP50876 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF144AP50876 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF144AP50876 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF144AP50876 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF144AP50876 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.42□□□□□ -1.38
RNF144AP50876 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RNF144AP50876 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.42□□□□□ -1.38
RNF144AP50876 SIGLEC31P-201ENST00000594237 551 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 AC013244.1-201ENST00000604279 193 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF144AP50876 AC078938.1-201ENST00000620993 318 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF144AP50876 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.42□□□□□ -1.38
RNF144AP50876 AC104837.1-201ENST00000444644 1587 ntBASIC6.42□□□□□ -1.38
RNF144AP50876 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF144AP50876 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF144AP50876 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF144AP50876 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF144AP50876 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RNF144AP50876 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.42□□□□□ -1.38
RNF144AP50876 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RNF144AP50876 PNPT1P2-201ENST00000456768 2050 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AL121950.1-201ENST00000624993 2077 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 SNX18P3-202ENST00000565670 1750 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AL596244.1-201ENST00000567068 3779 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF144AP50876 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 AL359195.2-201ENST00000623657 4412 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF144AP50876 RNA5SP394-201ENST00000364216 119 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 RNU6-1062P-201ENST00000383908 107 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 Y_RNA.455-201ENST00000384230 98 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 RNU6-310P-201ENST00000384655 107 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 RPS4XP9-201ENST00000405151 780 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AL136131.1-201ENST00000406079 803 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF144AP50876 AC018804.1-201ENST00000430381 618 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 RPS24P8-201ENST00000431490 402 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 NRBF2P3-201ENST00000432731 865 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AC012075.1-201ENST00000436549 580 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF144AP50876 AL035551.1-201ENST00000446931 348 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AL161722.1-201ENST00000446972 1032 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 MGAT2P1-201ENST00000449718 797 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AL929410.2-201ENST00000451170 189 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AL133351.3-201ENST00000454998 193 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 UBA52P3-201ENST00000491303 382 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 RN7SL518P-201ENST00000491887 280 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.41□□□□□ -1.38
RNF144AP50876 Y_RNA.661-201ENST00000516003 99 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 RNU6-1038P-201ENST00000516516 104 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 RNA5SP454-201ENST00000517231 127 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AP001803.1-201ENST00000525668 147 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.41□□□□□ -1.38
RNF144AP50876 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RNF144AP50876 MIR4800-201ENST00000537353 80 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AP000763.2-201ENST00000540641 163 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF144AP50876 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.41□□□□□ -1.38
RNF144AP50876 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.41□□□□□ -1.38
RNF144AP50876 AL031846.1-201ENST00000560933 314 ntBASIC6.41□□□□□ -1.38
RNF144AP50876 FAM30C-201ENST00000561158 410 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms