Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CCDC75P1-201ENST00000469247 791 ntBASIC4.42□□□□□ -1.7
CASP4P49662 RPL29P14-201ENST00000495837 428 ntBASIC4.42□□□□□ -1.7
CASP4P49662 HMGB3P13-201ENST00000511263 607 ntBASIC4.42□□□□□ -1.7
CASP4P49662 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.42□□□□□ -1.7
CASP4P49662 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.42□□□□□ -1.7
CASP4P49662 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.42□□□□□ -1.7
CASP4P49662 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.42□□□□□ -1.7
CASP4P49662 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.42□□□□□ -1.7
CASP4P49662 AC068446.3-201ENST00000555285 382 ntBASIC4.42□□□□□ -1.7
CASP4P49662 AC092868.3-201ENST00000560515 784 ntBASIC4.42□□□□□ -1.7
CASP4P49662 AC025627.2-201ENST00000576220 160 ntBASIC4.42□□□□□ -1.7
CASP4P49662 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.42□□□□□ -1.7
CASP4P49662 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.42□□□□□ -1.7
CASP4P49662 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CASP4P49662 AC090948.2-201ENST00000607363 564 ntBASIC4.42□□□□□ -1.7
CASP4P49662 AC084036.1-201ENST00000609190 508 ntBASIC4.42□□□□□ -1.7
CASP4P49662 MIR6867-201ENST00000610636 67 ntBASIC4.42□□□□□ -1.7
CASP4P49662 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CASP4P49662 AC006338.2-201ENST00000616864 791 ntBASIC4.42□□□□□ -1.7
CASP4P49662 RPL23AP61-201ENST00000623642 466 ntBASIC4.42□□□□□ -1.7
CASP4P49662 AC090506.2-201ENST00000624521 419 ntBASIC4.42□□□□□ -1.7
CASP4P49662 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
CASP4P49662 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 AC027290.2-201ENST00000623210 18662 ntBASIC4.41□□□□□ -1.7
CASP4P49662 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.41□□□□□ -1.7
CASP4P49662 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
CASP4P49662 RNA5SP317-201ENST00000410176 116 ntBASIC4.41□□□□□ -1.7
CASP4P49662 RNA5SP311-201ENST00000411290 116 ntBASIC4.41□□□□□ -1.7
CASP4P49662 AL356095.1-201ENST00000417217 199 ntBASIC4.41□□□□□ -1.7
CASP4P49662 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.41□□□□□ -1.7
CASP4P49662 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.41□□□□□ -1.7
CASP4P49662 AC007563.3-201ENST00000433233 371 ntBASIC4.41□□□□□ -1.7
CASP4P49662 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.41□□□□□ -1.7
CASP4P49662 TPT1P12-201ENST00000448968 492 ntBASIC4.41□□□□□ -1.7
CASP4P49662 RPS11P1-201ENST00000451072 473 ntBASIC4.41□□□□□ -1.7
CASP4P49662 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.41□□□□□ -1.7
CASP4P49662 RPL38P1-201ENST00000460914 211 ntBASIC4.41□□□□□ -1.7
CASP4P49662 PPIAP21-201ENST00000464473 501 ntBASIC4.41□□□□□ -1.7
CASP4P49662 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.41□□□□□ -1.7
CASP4P49662 RPL23AP2-201ENST00000471227 466 ntBASIC4.41□□□□□ -1.7
CASP4P49662 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.41□□□□□ -1.7
CASP4P49662 PCNAP1-201ENST00000505363 709 ntBASIC4.41□□□□□ -1.7
CASP4P49662 AC034244.2-201ENST00000514668 858 ntBASIC4.41□□□□□ -1.7
CASP4P49662 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.41□□□□□ -1.7
CASP4P49662 RNA5SP315-201ENST00000516340 116 ntBASIC4.41□□□□□ -1.7
CASP4P49662 RNA5SP312-201ENST00000517068 116 ntBASIC4.41□□□□□ -1.7
CASP4P49662 AC104997.1-201ENST00000519761 717 ntBASIC4.41□□□□□ -1.7
CASP4P49662 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.41□□□□□ -1.7
CASP4P49662 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.41□□□□□ -1.7
CASP4P49662 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.41□□□□□ -1.7
CASP4P49662 AC022968.1-201ENST00000567372 442 ntBASIC4.41□□□□□ -1.7
CASP4P49662 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.41□□□□□ -1.7
CASP4P49662 AC110743.1-201ENST00000584870 478 ntBASIC4.41□□□□□ -1.7
CASP4P49662 AC008638.3-201ENST00000603341 463 ntBASIC4.41□□□□□ -1.7
CASP4P49662 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 AC092079.1-201ENST00000558620 1985 ntBASIC4.41□□□□□ -1.7
CASP4P49662 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.41□□□□□ -1.7
CASP4P49662 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CASP4P49662 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CASP4P49662 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CASP4P49662 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.41□□□□□ -1.7
CASP4P49662 USP9YP4-201ENST00000424401 1745 ntBASIC4.41□□□□□ -1.7
CASP4P49662 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CASP4P49662 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CASP4P49662 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CASP4P49662 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.7
CASP4P49662 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CASP4P49662 SNORA3C-201ENST00000408792 125 ntBASIC4.4□□□□□ -1.71
CASP4P49662 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.4□□□□□ -1.71
CASP4P49662 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.4□□□□□ -1.71
CASP4P49662 OR5BE1P-201ENST00000425977 939 ntBASIC4.4□□□□□ -1.71
CASP4P49662 RNF19BPX-201ENST00000426224 625 ntBASIC4.4□□□□□ -1.71
CASP4P49662 AL158073.1-201ENST00000426848 1104 ntBASIC4.4□□□□□ -1.71
CASP4P49662 RPS26P47-201ENST00000427219 348 ntBASIC4.4□□□□□ -1.71
CASP4P49662 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CASP4P49662 AL606490.7-201ENST00000433136 191 ntBASIC4.4□□□□□ -1.71
CASP4P49662 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.4□□□□□ -1.71
CASP4P49662 CLIC4P1-201ENST00000453177 535 ntBASIC4.4□□□□□ -1.71
CASP4P49662 ACTR6P1-201ENST00000514311 1104 ntBASIC4.4□□□□□ -1.71
CASP4P49662 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.4□□□□□ -1.71
CASP4P49662 AC022784.5-201ENST00000522241 437 ntBASIC4.4□□□□□ -1.71
CASP4P49662 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.4□□□□□ -1.71
CASP4P49662 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.4□□□□□ -1.71
CASP4P49662 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.4□□□□□ -1.71
CASP4P49662 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CASP4P49662 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.4□□□□□ -1.71
CASP4P49662 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.4□□□□□ -1.71
CASP4P49662 MIR6868-201ENST00000611215 58 ntBASIC4.4□□□□□ -1.71
CASP4P49662 AL158196.1-201ENST00000616786 434 ntBASIC4.4□□□□□ -1.71
CASP4P49662 OR5BE1P-202ENST00000641168 1176 ntBASIC4.4□□□□□ -1.71
CASP4P49662 RLIMP1-201ENST00000339626 1680 ntBASIC4.4□□□□□ -1.71
CASP4P49662 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms