Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CR1P49238 AC104164.2-201ENST00000496953 495 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 FTH1P24-201ENST00000503502 462 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 MTATP6P22-201ENST00000507369 598 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 AC111000.3-201ENST00000508057 576 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 AC108157.1-201ENST00000510511 539 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.74□□□□□ -1.81
CX3CR1P49238 AC090281.1-201ENST00000523019 276 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.74□□□□□ -1.81
CX3CR1P49238 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CR1P49238 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CR1P49238 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CR1P49238 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.74□□□□□ -1.81
CX3CR1P49238 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.74□□□□□ -1.81
CX3CR1P49238 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.74□□□□□ -1.81
CX3CR1P49238 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.74□□□□□ -1.81
CX3CR1P49238 OR6R2P-201ENST00000609216 300 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 AC110792.4-201ENST00000609843 298 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.74□□□□□ -1.81
CX3CR1P49238 AC012020.1-201ENST00000624541 1728 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.74□□□□□ -1.81
CX3CR1P49238 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CX3CR1P49238 AC140479.6-201ENST00000633535 357 ntBASIC3.74□□□□□ -1.81
CX3CR1P49238 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CX3CR1P49238 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
CX3CR1P49238 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.74□□□□□ -1.81
CX3CR1P49238 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CX3CR1P49238 AC007529.1-201ENST00000418574 2178 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CX3CR1P49238 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CX3CR1P49238 SAGE2P-201ENST00000420011 2126 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 GTF2H2B-203ENST00000508065 1432 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CX3CR1P49238 RNVU1-6-201ENST00000364688 164 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AL583835.1-201ENST00000399570 407 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 RPL23AP48-201ENST00000406913 488 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 SNORA11F-201ENST00000408237 128 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AL590139.1-201ENST00000416267 400 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 MTND2P15-201ENST00000418575 892 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.73□□□□□ -1.81
CX3CR1P49238 RPL23AP1-201ENST00000428990 471 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 RPS6P12-201ENST00000432491 726 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.73□□□□□ -1.81
CX3CR1P49238 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.73□□□□□ -1.81
CX3CR1P49238 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.73□□□□□ -1.81
CX3CR1P49238 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.73□□□□□ -1.81
CX3CR1P49238 RPL23AP52-201ENST00000439311 478 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 RPL7P32-201ENST00000457119 744 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 S100A11P1-201ENST00000477525 312 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AC083829.1-201ENST00000503756 657 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.73□□□□□ -1.81
CX3CR1P49238 OR5H4P-201ENST00000510851 923 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 RN7SKP92-201ENST00000517266 244 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.73□□□□□ -1.81
CX3CR1P49238 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.73□□□□□ -1.81
CX3CR1P49238 OR4A2P-201ENST00000527276 913 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CX3CR1P49238 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.73□□□□□ -1.81
CX3CR1P49238 AP002812.4-201ENST00000532139 286 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.73□□□□□ -1.81
CX3CR1P49238 AC027176.2-201ENST00000559166 746 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.73□□□□□ -1.81
CX3CR1P49238 AL109741.3-201ENST00000561748 592 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.73□□□□□ -1.81
CX3CR1P49238 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CX3CR1P49238 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AC069304.3-201ENST00000603938 1084 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CX3CR1P49238 AL132640.2-201ENST00000559968 1698 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.73□□□□□ -1.81
CX3CR1P49238 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.73□□□□□ -1.81
CX3CR1P49238 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
CX3CR1P49238 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
CX3CR1P49238 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CX3CR1P49238 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.73□□□□□ -1.81
CX3CR1P49238 AC100871.1-201ENST00000507871 1456 ntBASIC3.73□□□□□ -1.81
CX3CR1P49238 AC018555.1-201ENST00000567548 1980 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC007390.2-201ENST00000606229 3803 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CX3CR1P49238 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.72□□□□□ -1.81
CX3CR1P49238 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.72□□□□□ -1.81
CX3CR1P49238 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CX3CR1P49238 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
CX3CR1P49238 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CX3CR1P49238 RNA5SP505-201ENST00000364748 108 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AL590290.1-201ENST00000405336 380 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 Z86062.1-201ENST00000406773 777 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 MIR1179-201ENST00000408703 91 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.72□□□□□ -1.81
CX3CR1P49238 RAC1P3-201ENST00000416129 580 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 MTND2P11-201ENST00000423638 648 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 AL031736.2-201ENST00000426573 787 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 BRWD1P3-201ENST00000428816 390 ntBASIC3.72□□□□□ -1.81
CX3CR1P49238 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.72□□□□□ -1.81
CX3CR1P49238 PRELID3BP7-201ENST00000503606 469 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms