Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 NUTF2P3-201ENST00000448540 384 ntBASIC4.61□□□□□ -1.67
LHX1P48742 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.61□□□□□ -1.67
LHX1P48742 AC002553.2-201ENST00000453217 340 ntBASIC4.61□□□□□ -1.67
LHX1P48742 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.61□□□□□ -1.67
LHX1P48742 UBTFL6-201ENST00000477929 1024 ntBASIC4.61□□□□□ -1.67
LHX1P48742 METTL15P1-201ENST00000481421 1045 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AC012158.1-204ENST00000483430 465 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AC105137.1-201ENST00000484355 562 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AL592156.1-201ENST00000508758 304 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.61□□□□□ -1.67
LHX1P48742 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.61□□□□□ -1.67
LHX1P48742 AP000916.1-201ENST00000533869 835 ntBASIC4.61□□□□□ -1.67
LHX1P48742 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.61□□□□□ -1.67
LHX1P48742 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.61□□□□□ -1.67
LHX1P48742 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.61□□□□□ -1.67
LHX1P48742 AC012254.4-201ENST00000588843 273 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AC008759.1-201ENST00000589783 983 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.61□□□□□ -1.67
LHX1P48742 AP005229.2-201ENST00000609980 697 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AC055764.2-201ENST00000610089 670 ntBASIC4.61□□□□□ -1.67
LHX1P48742 AL445567.2-201ENST00000618935 498 ntBASIC4.61□□□□□ -1.67
LHX1P48742 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LHX1P48742 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LHX1P48742 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LHX1P48742 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
LHX1P48742 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.6□□□□□ -1.67
LHX1P48742 BX005019.1-201ENST00000561881 1810 ntBASIC4.6□□□□□ -1.67
LHX1P48742 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LHX1P48742 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 SNORD56.4-201ENST00000363883 71 ntBASIC4.6□□□□□ -1.67
LHX1P48742 RNU6-304P-201ENST00000364855 107 ntBASIC4.6□□□□□ -1.67
LHX1P48742 RNA5SP22-201ENST00000365393 109 ntBASIC4.6□□□□□ -1.67
LHX1P48742 MIR195-201ENST00000385194 87 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AL035405.1-201ENST00000400795 710 ntBASIC4.6□□□□□ -1.67
LHX1P48742 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.6□□□□□ -1.67
LHX1P48742 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 RPL21P108-201ENST00000413857 481 ntBASIC4.6□□□□□ -1.67
LHX1P48742 VTA1P1-201ENST00000414044 866 ntBASIC4.6□□□□□ -1.67
LHX1P48742 RPL6P29-201ENST00000414863 865 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.6□□□□□ -1.67
LHX1P48742 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 AL157831.1-201ENST00000426134 473 ntBASIC4.6□□□□□ -1.67
LHX1P48742 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.6□□□□□ -1.67
LHX1P48742 CEACAMP1-201ENST00000434624 1035 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.6□□□□□ -1.67
LHX1P48742 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.6□□□□□ -1.67
LHX1P48742 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 RPL23AP81-201ENST00000455252 467 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 RPL23AP12-201ENST00000467573 473 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AC041039.1-201ENST00000485656 536 ntBASIC4.6□□□□□ -1.67
LHX1P48742 RN7SL691P-201ENST00000494487 301 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AC008958.1-201ENST00000511047 682 ntBASIC4.6□□□□□ -1.67
LHX1P48742 RNA5SP73-201ENST00000516744 108 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AP003730.1-201ENST00000524605 285 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.6□□□□□ -1.67
LHX1P48742 AP003102.1-201ENST00000525638 661 ntBASIC4.6□□□□□ -1.67
LHX1P48742 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
LHX1P48742 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 RPL21P7-201ENST00000557463 483 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.6□□□□□ -1.67
LHX1P48742 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.6□□□□□ -1.67
LHX1P48742 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.6□□□□□ -1.67
LHX1P48742 AC124283.4-201ENST00000581815 456 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AC011477.5-201ENST00000586571 259 ntBASIC4.6□□□□□ -1.67
LHX1P48742 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.6□□□□□ -1.67
LHX1P48742 ZNF92P3-201ENST00000596594 954 ntBASIC4.6□□□□□ -1.67
LHX1P48742 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 BNIP3P31-201ENST00000604515 566 ntBASIC4.6□□□□□ -1.67
LHX1P48742 AL354984.3-201ENST00000604803 325 ntBASIC4.6□□□□□ -1.67
LHX1P48742 ARF4P1-201ENST00000605447 541 ntBASIC4.6□□□□□ -1.67
LHX1P48742 FAM27D1-201ENST00000612308 341 ntBASIC4.6□□□□□ -1.67
LHX1P48742 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.6□□□□□ -1.67
LHX1P48742 MFSD8-213ENST00000641134 1327 ntBASIC4.6□□□□□ -1.67
LHX1P48742 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 MTCO1P18-201ENST00000455518 1419 ntBASIC4.6□□□□□ -1.67
LHX1P48742 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.6□□□□□ -1.67
LHX1P48742 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 AC000123.3-201ENST00000624029 4975 ntBASIC4.6□□□□□ -1.67
LHX1P48742 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LHX1P48742 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LHX1P48742 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms