Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RPS20P21-201ENST00000466859 343 ntBASIC4.03□□□□□ -1.76
CDX1P47902 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 AC093270.2-201ENST00000486157 792 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.03□□□□□ -1.76
CDX1P47902 RPS6P4-201ENST00000494693 758 ntBASIC4.03□□□□□ -1.76
CDX1P47902 CAB39P1-201ENST00000502277 460 ntBASIC4.03□□□□□ -1.76
CDX1P47902 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 AC011352.3-201ENST00000505162 593 ntBASIC4.03□□□□□ -1.76
CDX1P47902 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.03□□□□□ -1.76
CDX1P47902 KRT19P6-201ENST00000510983 209 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC021451.1-201ENST00000523498 1129 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 OR11J2P-201ENST00000555298 907 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.03□□□□□ -1.76
CDX1P47902 MIR4646-201ENST00000580775 63 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.03□□□□□ -1.76
CDX1P47902 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.03□□□□□ -1.76
CDX1P47902 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 AC023762.1-201ENST00000603280 584 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC113194.1-201ENST00000606037 500 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC104763.3-201ENST00000613765 618 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC140113.4-201ENST00000622087 222 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC109454.4-201ENST00000623411 649 ntBASIC4.03□□□□□ -1.76
CDX1P47902 AC010608.3-201ENST00000625048 527 ntBASIC4.03□□□□□ -1.76
CDX1P47902 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 Z73965.1-201ENST00000623412 2297 ntBASIC4.03□□□□□ -1.76
CDX1P47902 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.03□□□□□ -1.76
CDX1P47902 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDX1P47902 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.03□□□□□ -1.76
CDX1P47902 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.03□□□□□ -1.76
CDX1P47902 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDX1P47902 AC074029.4-201ENST00000624796 1859 ntBASIC4.03□□□□□ -1.77
CDX1P47902 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CDX1P47902 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.03□□□□□ -1.77
CDX1P47902 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDX1P47902 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDX1P47902 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.02□□□□□ -1.77
CDX1P47902 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDX1P47902 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDX1P47902 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CDX1P47902 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDX1P47902 SNORA58B-201ENST00000364259 136 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AL645733.1-201ENST00000402250 217 ntBASIC4.02□□□□□ -1.77
CDX1P47902 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC234779.1-201ENST00000425910 285 ntBASIC4.02□□□□□ -1.77
CDX1P47902 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.02□□□□□ -1.77
CDX1P47902 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.02□□□□□ -1.77
CDX1P47902 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDX1P47902 AC010881.1-201ENST00000433830 235 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.02□□□□□ -1.77
CDX1P47902 AC092647.3-201ENST00000443044 633 ntBASIC4.02□□□□□ -1.77
CDX1P47902 RPL7P59-201ENST00000447700 943 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC092647.2-201ENST00000452998 253 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.02□□□□□ -1.77
CDX1P47902 RN7SL517P-201ENST00000462240 305 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.02□□□□□ -1.77
CDX1P47902 AC090114.3-201ENST00000479267 829 ntBASIC4.02□□□□□ -1.77
CDX1P47902 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.02□□□□□ -1.77
CDX1P47902 RPL7P41-201ENST00000485823 957 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC079203.1-201ENST00000487972 404 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC109471.1-201ENST00000511631 612 ntBASIC4.02□□□□□ -1.77
CDX1P47902 RPL23AP53-201ENST00000521854 457 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC090281.1-201ENST00000523019 276 ntBASIC4.02□□□□□ -1.77
CDX1P47902 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.02□□□□□ -1.77
CDX1P47902 AP001207.1-201ENST00000524051 481 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.02□□□□□ -1.77
CDX1P47902 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.02□□□□□ -1.77
CDX1P47902 AP000676.2-201ENST00000529711 301 ntBASIC4.02□□□□□ -1.77
CDX1P47902 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.02□□□□□ -1.77
CDX1P47902 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.02□□□□□ -1.77
CDX1P47902 AC124068.1-201ENST00000563131 678 ntBASIC4.02□□□□□ -1.77
CDX1P47902 EIF5A2P1-201ENST00000564027 460 ntBASIC4.02□□□□□ -1.77
CDX1P47902 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDX1P47902 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.02□□□□□ -1.77
CDX1P47902 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.02□□□□□ -1.77
CDX1P47902 AC022069.1-201ENST00000582910 658 ntBASIC4.02□□□□□ -1.77
CDX1P47902 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.02□□□□□ -1.77
CDX1P47902 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.02□□□□□ -1.77
CDX1P47902 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.02□□□□□ -1.77
CDX1P47902 AC069431.2-201ENST00000604149 1099 ntBASIC4.02□□□□□ -1.77
CDX1P47902 BNIP3P35-201ENST00000604530 490 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC112220.2-201ENST00000605513 533 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AL445222.1-201ENST00000607259 628 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC118658.2-201ENST00000618697 459 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AP003485.1-201ENST00000625093 753 ntBASIC4.02□□□□□ -1.77
CDX1P47902 AC068620.4-201ENST00000636730 1182 ntBASIC4.02□□□□□ -1.77
CDX1P47902 MIR6715B-201ENST00000637172 77 ntBASIC4.02□□□□□ -1.77
CDX1P47902 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.02□□□□□ -1.77
CDX1P47902 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDX1P47902 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms