Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CASKP1-201ENST00000412870 582 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AC009237.5-201ENST00000414271 501 ntBASIC4.56□□□□□ -1.68
SSR1P43307 TMSB10P2-201ENST00000416049 131 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AL161631.1-201ENST00000417933 486 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.56□□□□□ -1.68
SSR1P43307 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.56□□□□□ -1.68
SSR1P43307 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.56□□□□□ -1.68
SSR1P43307 AC011998.1-201ENST00000433403 117 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.56□□□□□ -1.68
SSR1P43307 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
SSR1P43307 AC006499.6-201ENST00000511169 607 ntBASIC4.56□□□□□ -1.68
SSR1P43307 MTCO1P30-201ENST00000515244 580 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AC067904.2-201ENST00000517322 1283 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.56□□□□□ -1.68
SSR1P43307 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.56□□□□□ -1.68
SSR1P43307 AC084783.1-201ENST00000565846 910 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AC067852.4-201ENST00000590314 478 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AC093765.1-201ENST00000603758 881 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AC233309.1-201ENST00000619522 751 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SSR1P43307 AC145207.9-201ENST00000623802 325 ntBASIC4.56□□□□□ -1.68
SSR1P43307 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSR1P43307 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSR1P43307 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSR1P43307 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSR1P43307 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SSR1P43307 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SSR1P43307 RNU6-618P-201ENST00000363518 112 ntBASIC4.55□□□□□ -1.68
SSR1P43307 SNORD66.1-201ENST00000391230 76 ntBASIC4.55□□□□□ -1.68
SSR1P43307 AC240504.1-201ENST00000395709 845 ntBASIC4.55□□□□□ -1.68
SSR1P43307 JKAMPP1-201ENST00000413804 919 ntBASIC4.55□□□□□ -1.68
SSR1P43307 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.55□□□□□ -1.68
SSR1P43307 RPEP3-201ENST00000425462 676 ntBASIC4.55□□□□□ -1.68
SSR1P43307 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.55□□□□□ -1.68
SSR1P43307 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.55□□□□□ -1.68
SSR1P43307 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SSR1P43307 HMGB3P30-201ENST00000457863 606 ntBASIC4.55□□□□□ -1.68
SSR1P43307 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.55□□□□□ -1.68
SSR1P43307 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.55□□□□□ -1.68
SSR1P43307 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.55□□□□□ -1.68
SSR1P43307 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.55□□□□□ -1.68
SSR1P43307 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.55□□□□□ -1.68
SSR1P43307 AC008782.1-201ENST00000603386 430 ntBASIC4.55□□□□□ -1.68
SSR1P43307 AL592436.1-201ENST00000605135 558 ntBASIC4.55□□□□□ -1.68
SSR1P43307 MIR6780A-201ENST00000615089 68 ntBASIC4.55□□□□□ -1.68
SSR1P43307 MIR6891-201ENST00000618788 93 ntBASIC4.55□□□□□ -1.68
SSR1P43307 AC019278.1-201ENST00000623516 479 ntBASIC4.55□□□□□ -1.68
SSR1P43307 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.55□□□□□ -1.68
SSR1P43307 AC125257.1-201ENST00000560400 2930 ntBASIC4.55□□□□□ -1.68
SSR1P43307 AL592148.3-201ENST00000608771 2646 ntBASIC4.55□□□□□ -1.68
SSR1P43307 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSR1P43307 DHX40P1-201ENST00000588725 1412 ntBASIC4.55□□□□□ -1.68
SSR1P43307 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 OTUD4P1-201ENST00000237841 3067 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AP001148.1-201ENST00000624124 2359 ntBASIC4.54□□□□□ -1.68
SSR1P43307 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSR1P43307 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSR1P43307 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
SSR1P43307 MIR331-201ENST00000362302 94 ntBASIC4.54□□□□□ -1.68
SSR1P43307 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSR1P43307 AL607077.1-201ENST00000401718 499 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AL133270.1-201ENST00000402635 279 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.54□□□□□ -1.68
SSR1P43307 AC007390.1-201ENST00000415722 356 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AL132765.1-201ENST00000434165 553 ntBASIC4.54□□□□□ -1.68
SSR1P43307 HLA-N-201ENST00000437516 135 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AC114495.1-201ENST00000441274 436 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.54□□□□□ -1.68
SSR1P43307 AL157884.3-201ENST00000448273 1184 ntBASIC4.54□□□□□ -1.68
SSR1P43307 ABCF2P2-201ENST00000450549 296 ntBASIC4.54□□□□□ -1.68
SSR1P43307 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 DHFRP3-201ENST00000455595 559 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AC053481.1-201ENST00000467217 306 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.54□□□□□ -1.68
SSR1P43307 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.54□□□□□ -1.68
SSR1P43307 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSR1P43307 RN7SKP92-201ENST00000517266 244 ntBASIC4.54□□□□□ -1.68
SSR1P43307 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AC087888.1-201ENST00000550884 1254 ntBASIC4.54□□□□□ -1.68
SSR1P43307 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 AL049874.4-201ENST00000557593 255 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.54□□□□□ -1.68
SSR1P43307 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.54□□□□□ -1.68
SSR1P43307 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 AC079587.1-201ENST00000603846 277 ntBASIC4.54□□□□□ -1.68
SSR1P43307 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSR1P43307 AL021997.2-201ENST00000615674 271 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AL133370.2-201ENST00000619934 439 ntBASIC4.54□□□□□ -1.68
SSR1P43307 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SSR1P43307 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSR1P43307 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSR1P43307 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
SSR1P43307 AL133383.2-201ENST00000622958 2336 ntBASIC4.54□□□□□ -1.68
SSR1P43307 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms