Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.71□□□□□ -1.5
LTBRP36941 AF250324.2-201ENST00000608299 610 ntBASIC5.71□□□□□ -1.5
LTBRP36941 AC093799.2-201ENST00000610062 578 ntBASIC5.71□□□□□ -1.5
LTBRP36941 AC090517.2-201ENST00000614966 680 ntBASIC5.71□□□□□ -1.5
LTBRP36941 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
LTBRP36941 AC027807.2-201ENST00000616099 408 ntBASIC5.71□□□□□ -1.5
LTBRP36941 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.71□□□□□ -1.5
LTBRP36941 AC091905.4-201ENST00000623432 202 ntBASIC5.71□□□□□ -1.5
LTBRP36941 AC231657.1-201ENST00000624313 397 ntBASIC5.71□□□□□ -1.5
LTBRP36941 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
LTBRP36941 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LTBRP36941 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBRP36941 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 ZNF402P-201ENST00000404435 3100 ntBASIC5.7□□□□□ -1.5
LTBRP36941 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 AC018809.2-201ENST00000602436 3823 ntBASIC5.7□□□□□ -1.5
LTBRP36941 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBRP36941 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBRP36941 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 RNU6-462P-201ENST00000362659 105 ntBASIC5.7□□□□□ -1.5
LTBRP36941 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 AC002524.1-201ENST00000411687 547 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AC048351.1-201ENST00000420064 602 ntBASIC5.7□□□□□ -1.5
LTBRP36941 OFD1P18Y-201ENST00000420889 959 ntBASIC5.7□□□□□ -1.5
LTBRP36941 COX6CP17-201ENST00000421389 185 ntBASIC5.7□□□□□ -1.5
LTBRP36941 OR8F1P-201ENST00000425243 930 ntBASIC5.7□□□□□ -1.5
LTBRP36941 C4BPAP2-201ENST00000428434 478 ntBASIC5.7□□□□□ -1.5
LTBRP36941 RPL7P56-201ENST00000429441 717 ntBASIC5.7□□□□□ -1.5
LTBRP36941 MTND1P2-201ENST00000430604 821 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.7□□□□□ -1.5
LTBRP36941 AL035551.1-201ENST00000446931 348 ntBASIC5.7□□□□□ -1.5
LTBRP36941 FGF7P6-202ENST00000451282 293 ntBASIC5.7□□□□□ -1.5
LTBRP36941 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBRP36941 HMGB1P4-201ENST00000455362 567 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBRP36941 OR4G11P-201ENST00000492842 939 ntBASIC5.7□□□□□ -1.5
LTBRP36941 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 AC025674.1-201ENST00000507074 324 ntBASIC5.7□□□□□ -1.5
LTBRP36941 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 SCARNA16.4-201ENST00000516956 187 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AP002748.2-201ENST00000528671 348 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AC027667.1-201ENST00000545814 304 ntBASIC5.7□□□□□ -1.5
LTBRP36941 CYCSP2-201ENST00000558168 301 ntBASIC5.7□□□□□ -1.5
LTBRP36941 HMGN2P47-201ENST00000559378 272 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AC074050.1-201ENST00000563247 211 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBRP36941 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBRP36941 VN1R84P-201ENST00000593697 235 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AP000403.1-201ENST00000603349 851 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AC115286.1-201ENST00000604298 434 ntBASIC5.7□□□□□ -1.5
LTBRP36941 AL022154.1-201ENST00000604698 785 ntBASIC5.7□□□□□ -1.5
LTBRP36941 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.7□□□□□ -1.5
LTBRP36941 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
LTBRP36941 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.7□□□□□ -1.5
LTBRP36941 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBRP36941 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LTBRP36941 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.7□□□□□ -1.5
LTBRP36941 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LTBRP36941 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBRP36941 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LTBRP36941 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.7□□□□□ -1.5
LTBRP36941 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LTBRP36941 AC007114.2-201ENST00000576014 4281 ntBASIC5.69□□□□□ -1.5
LTBRP36941 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.69□□□□□ -1.5
LTBRP36941 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.69□□□□□ -1.5
LTBRP36941 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LTBRP36941 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LTBRP36941 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
LTBRP36941 AC016716.1-201ENST00000265882 708 ntBASIC5.69□□□□□ -1.5
LTBRP36941 SNURFL-201ENST00000309296 343 ntBASIC5.69□□□□□ -1.5
LTBRP36941 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LTBRP36941 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LTBRP36941 Y_RNA.88-201ENST00000363029 99 ntBASIC5.69□□□□□ -1.5
LTBRP36941 AC025750.1-201ENST00000399891 379 ntBASIC5.69□□□□□ -1.5
LTBRP36941 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.69□□□□□ -1.5
LTBRP36941 RNU2-22P-201ENST00000411266 212 ntBASIC5.69□□□□□ -1.5
LTBRP36941 HMGN1P14-201ENST00000412459 517 ntBASIC5.69□□□□□ -1.5
LTBRP36941 AC234782.4-201ENST00000417646 1048 ntBASIC5.69□□□□□ -1.5
LTBRP36941 RPS27AP14-201ENST00000422868 454 ntBASIC5.69□□□□□ -1.5
LTBRP36941 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.69□□□□□ -1.5
LTBRP36941 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.69□□□□□ -1.5
LTBRP36941 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms