Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6-1225P-201ENST00000516336 65 ntBASIC5.27□□□□□ -1.57
SLC6A4P31645 AC020937.1-201ENST00000519677 1013 ntBASIC5.27□□□□□ -1.57
SLC6A4P31645 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC6A4P31645 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC6A4P31645 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC6A4P31645 OR8A2P-201ENST00000528631 952 ntBASIC5.27□□□□□ -1.57
SLC6A4P31645 AC027369.5-201ENST00000533838 755 ntBASIC5.27□□□□□ -1.57
SLC6A4P31645 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC6A4P31645 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC6A4P31645 AC007599.1-201ENST00000568688 1174 ntBASIC5.27□□□□□ -1.57
SLC6A4P31645 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC6A4P31645 Mico1.1-201ENST00000611698 204 ntBASIC5.27□□□□□ -1.57
SLC6A4P31645 AC016717.3-201ENST00000624730 554 ntBASIC5.27□□□□□ -1.57
SLC6A4P31645 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC6A4P31645 AC116618.1-201ENST00000634617 774 ntBASIC5.27□□□□□ -1.57
SLC6A4P31645 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC6A4P31645 AP005435.3-201ENST00000531260 3198 ntBASIC5.27□□□□□ -1.57
SLC6A4P31645 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC6A4P31645 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC6A4P31645 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC6A4P31645 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC6A4P31645 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC6A4P31645 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC6A4P31645 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC6A4P31645 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC6A4P31645 DBF4P1-201ENST00000412976 1892 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC6A4P31645 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC103591.2-201ENST00000265259 766 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 RNA5SP123-201ENST00000363244 119 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 Y_RNA.311-201ENST00000365068 96 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 RNU6-619P-201ENST00000365146 108 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 RNU6-192P-201ENST00000391253 100 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 TPT1P2-201ENST00000413105 503 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 FTLP19-201ENST00000433300 394 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 MTND1P34-201ENST00000438556 671 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 RPS7P5-201ENST00000441482 581 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 BX842559.2-201ENST00000451418 605 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 RPL12P26-201ENST00000452430 487 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC091685.2-201ENST00000454924 864 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 ACTG1P13-201ENST00000486987 1043 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 ARL4AP1-201ENST00000503220 705 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 SNORA70.11-201ENST00000515987 138 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 SNORA70.13-201ENST00000516116 138 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC138832.1-201ENST00000522871 556 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 HIGD1AP5-201ENST00000529959 259 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 MIR4646-201ENST00000580775 63 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 VN1R84P-201ENST00000593697 235 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AP001981.2-201ENST00000603241 418 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AC105254.2-201ENST00000603636 436 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AC131235.4-201ENST00000609288 620 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 MIR6820-201ENST00000611508 62 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AC069209.1-201ENST00000619282 651 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AC068792.1-201ENST00000621354 417 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AC008443.7-201ENST00000622195 246 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC127502.3-201ENST00000636170 1206 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 AL392088.2-201ENST00000637607 285 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC6A4P31645 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC125336.1-201ENST00000508893 2827 ntBASIC5.26□□□□□ -1.57
SLC6A4P31645 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC6A4P31645 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC6A4P31645 AC011477.1-204ENST00000623416 1325 ntBASIC5.25□□□□□ -1.57
SLC6A4P31645 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC6A4P31645 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
SLC6A4P31645 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms