Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CLIP1P30622 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CLIP1P30622 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP1P30622 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP1P30622 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP1P30622 SCN1A-220ENST00000641603 12506 ntBASIC6.05□□□□□ -1.44
CLIP1P30622 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP1P30622 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP1P30622 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP1P30622 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.05□□□□□ -1.44
CLIP1P30622 KRR1P1-201ENST00000419430 803 ntBASIC6.05□□□□□ -1.44
CLIP1P30622 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP1P30622 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP1P30622 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP1P30622 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP1P30622 NPM1P29-201ENST00000483112 803 ntBASIC6.05□□□□□ -1.44
CLIP1P30622 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP1P30622 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.05□□□□□ -1.44
CLIP1P30622 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP1P30622 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.05□□□□□ -1.44
CLIP1P30622 LSM1P2-201ENST00000604911 322 ntBASIC6.05□□□□□ -1.44
CLIP1P30622 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP1P30622 AL357559.1-201ENST00000622228 274 ntBASIC6.05□□□□□ -1.44
CLIP1P30622 ATE1-AS1-202ENST00000636460 506 ntBASIC6.05□□□□□ -1.44
CLIP1P30622 U6.105-201ENST00000637379 88 ntBASIC6.05□□□□□ -1.44
CLIP1P30622 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC6.05□□□□□ -1.44
CLIP1P30622 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC6.05□□□□□ -1.44
CLIP1P30622 IPO8P1-201ENST00000455509 3109 ntBASIC6.05□□□□□ -1.44
CLIP1P30622 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP1P30622 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CLIP1P30622 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CLIP1P30622 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CLIP1P30622 DDX18P6-201ENST00000450119 1997 ntBASIC6.04□□□□□ -1.44
CLIP1P30622 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC6.04□□□□□ -1.44
CLIP1P30622 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
CLIP1P30622 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC6.04□□□□□ -1.44
CLIP1P30622 AP000907.1-201ENST00000428428 510 ntBASIC6.04□□□□□ -1.44
CLIP1P30622 ELOCP18-201ENST00000434209 337 ntBASIC6.04□□□□□ -1.44
CLIP1P30622 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.04□□□□□ -1.44
CLIP1P30622 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP1P30622 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
CLIP1P30622 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP1P30622 RNA5SP164-201ENST00000516533 110 ntBASIC6.04□□□□□ -1.44
CLIP1P30622 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.04□□□□□ -1.44
CLIP1P30622 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.04□□□□□ -1.44
CLIP1P30622 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.04□□□□□ -1.44
CLIP1P30622 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.04□□□□□ -1.44
CLIP1P30622 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP1P30622 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.04□□□□□ -1.44
CLIP1P30622 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP1P30622 CASC19-284ENST00000642142 1868 ntBASIC6.04□□□□□ -1.44
CLIP1P30622 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP1P30622 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP1P30622 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.03□□□□□ -1.44
CLIP1P30622 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP1P30622 MIR93-201ENST00000385024 80 ntBASIC6.03□□□□□ -1.44
CLIP1P30622 CYCSP10-201ENST00000417973 294 ntBASIC6.03□□□□□ -1.44
CLIP1P30622 AC008280.1-201ENST00000418851 412 ntBASIC6.03□□□□□ -1.44
CLIP1P30622 SETP9-201ENST00000423837 832 ntBASIC6.03□□□□□ -1.44
CLIP1P30622 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP1P30622 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP1P30622 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.03□□□□□ -1.44
CLIP1P30622 PCA3_2.1-201ENST00000612507 409 ntBASIC6.03□□□□□ -1.44
CLIP1P30622 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC6.03□□□□□ -1.44
CLIP1P30622 AC006484.1-201ENST00000435086 1884 ntBASIC6.03□□□□□ -1.44
CLIP1P30622 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP1P30622 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP1P30622 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP1P30622 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP1P30622 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP1P30622 RNA5SP51-201ENST00000364750 119 ntBASIC6.02□□□□□ -1.45
CLIP1P30622 PTMAP5-201ENST00000393073 333 ntBASIC6.02□□□□□ -1.45
CLIP1P30622 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.02□□□□□ -1.45
CLIP1P30622 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP1P30622 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP1P30622 RPS3AP12-201ENST00000443616 753 ntBASIC6.02□□□□□ -1.45
CLIP1P30622 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP1P30622 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP1P30622 HMGN1P15-201ENST00000513870 295 ntBASIC6.02□□□□□ -1.45
CLIP1P30622 SNORA74D-201ENST00000516404 141 ntBASIC6.02□□□□□ -1.45
CLIP1P30622 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP1P30622 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP1P30622 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC6.02□□□□□ -1.45
CLIP1P30622 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.02□□□□□ -1.45
CLIP1P30622 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CLIP1P30622 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CLIP1P30622 AC139426.3-201ENST00000605648 2059 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.01□□□□□ -1.45
CLIP1P30622 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP1P30622 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLIP1P30622 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLIP1P30622 MIR483-201ENST00000385070 76 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CLIP1P30622 RNU6-316P-201ENST00000391027 107 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP1P30622 ATP5A1P2-201ENST00000412323 255 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 RPS29P4-201ENST00000414733 161 ntBASIC6.01□□□□□ -1.45
CLIP1P30622 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.01□□□□□ -1.45
CLIP1P30622 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CLIP1P30622 AC104619.4-201ENST00000510773 249 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms