Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.41□□□□□ -1.54
POLR2AP24928 AC022079.2-201ENST00000619739 566 ntBASIC5.41□□□□□ -1.54
POLR2AP24928 AL160394.1-201ENST00000624765 724 ntBASIC5.41□□□□□ -1.54
POLR2AP24928 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
POLR2AP24928 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
POLR2AP24928 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
POLR2AP24928 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
POLR2AP24928 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
POLR2AP24928 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
POLR2AP24928 AL390237.1-201ENST00000404226 1415 ntBASIC5.41□□□□□ -1.54
POLR2AP24928 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
POLR2AP24928 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
POLR2AP24928 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
POLR2AP24928 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
POLR2AP24928 RNU6-304P-201ENST00000364855 107 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 AP002784.2-201ENST00000397300 549 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 RPL12P9-201ENST00000412942 488 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.4□□□□□ -1.54
POLR2AP24928 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.4□□□□□ -1.54
POLR2AP24928 MTCYBP39-201ENST00000437562 491 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.4□□□□□ -1.54
POLR2AP24928 EEF1A1P39-201ENST00000440791 250 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.4□□□□□ -1.54
POLR2AP24928 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.4□□□□□ -1.54
POLR2AP24928 AC069304.1-201ENST00000491593 704 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.4□□□□□ -1.54
POLR2AP24928 AC109927.2-201ENST00000506416 303 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 AC108064.1-201ENST00000513791 460 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 MTCYBP41-201ENST00000528913 1123 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.4□□□□□ -1.54
POLR2AP24928 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.4□□□□□ -1.54
POLR2AP24928 AC122133.1-201ENST00000613964 233 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 AC012442.3-202ENST00000636742 206 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 AC090897.3-201ENST00000636973 1157 ntBASIC5.4□□□□□ -1.54
POLR2AP24928 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
POLR2AP24928 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
POLR2AP24928 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
POLR2AP24928 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
POLR2AP24928 AP000641.1-201ENST00000531988 1639 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.4□□□□□ -1.55
POLR2AP24928 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.4□□□□□ -1.55
POLR2AP24928 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
POLR2AP24928 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
POLR2AP24928 OR5P1P-201ENST00000299512 925 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 RNU6-83P-201ENST00000384568 112 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.4□□□□□ -1.55
POLR2AP24928 AC006366.1-201ENST00000422002 759 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.4□□□□□ -1.55
POLR2AP24928 OR51B8P-201ENST00000449892 769 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC5.4□□□□□ -1.55
POLR2AP24928 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.4□□□□□ -1.55
POLR2AP24928 RPL21P131-201ENST00000497298 483 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.4□□□□□ -1.55
POLR2AP24928 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.4□□□□□ -1.55
POLR2AP24928 MTCO3P24-201ENST00000572729 782 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC5.4□□□□□ -1.55
POLR2AP24928 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.4□□□□□ -1.55
POLR2AP24928 DEFB131E-202ENST00000602581 683 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.4□□□□□ -1.55
POLR2AP24928 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC5.4□□□□□ -1.55
POLR2AP24928 AL359715.5-201ENST00000623431 443 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 AC019080.5-201ENST00000624891 757 ntBASIC5.4□□□□□ -1.55
POLR2AP24928 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
POLR2AP24928 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
POLR2AP24928 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.39□□□□□ -1.55
POLR2AP24928 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
POLR2AP24928 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
POLR2AP24928 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
POLR2AP24928 AC233289.1-201ENST00000403700 508 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AC011233.1-201ENST00000422812 283 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.39□□□□□ -1.55
POLR2AP24928 BX119904.1-201ENST00000432026 348 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 RPL23AP83-201ENST00000434984 473 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AC013410.1-201ENST00000436223 1232 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AL353706.1-201ENST00000436728 494 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.39□□□□□ -1.55
POLR2AP24928 NPM1P13-201ENST00000452663 865 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AC011825.1-201ENST00000484967 388 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.39□□□□□ -1.55
POLR2AP24928 AC118282.2-201ENST00000508739 374 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.39□□□□□ -1.55
POLR2AP24928 AC119751.1-201ENST00000513357 765 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AC105185.1-201ENST00000518705 535 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.39□□□□□ -1.55
POLR2AP24928 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.39□□□□□ -1.55
POLR2AP24928 DUXAP11-201ENST00000603858 526 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AC121247.2-201ENST00000604776 136 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 ZYXP1-201ENST00000617638 118 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AF246928.1-201ENST00000623768 87 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 AL359715.4-201ENST00000606629 1436 ntBASIC5.39□□□□□ -1.55
POLR2AP24928 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.39□□□□□ -1.55
POLR2AP24928 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
POLR2AP24928 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
POLR2AP24928 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.39□□□□□ -1.55
POLR2AP24928 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
POLR2AP24928 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
POLR2AP24928 AP001157.1-201ENST00000550837 2339 ntBASIC5.38□□□□□ -1.55
POLR2AP24928 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
POLR2AP24928 RNU6-761P-201ENST00000384148 107 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms