Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 AC027544.3-201ENST00000535082 757 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF4P23510 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF4P23510 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF4P23510 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 MIR3614-201ENST00000581261 86 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.8□□□□□ -1.64
TNFSF4P23510 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TNFSF4P23510 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 AL596327.1-201ENST00000603629 213 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 Z99497.2-201ENST00000603634 310 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AC104687.2-201ENST00000604442 342 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AC018714.1-201ENST00000605028 208 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AC010680.4-201ENST00000605334 543 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 AC009318.4-201ENST00000620496 486 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TNFSF4P23510 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TNFSF4P23510 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 OR4G11P-202ENST00000642116 1414 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TNFSF4P23510 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.8□□□□□ -1.64
TNFSF4P23510 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFSF4P23510 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 AC009951.1-201ENST00000623674 2614 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TNFSF4P23510 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TNFSF4P23510 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 PABPC1P7-201ENST00000413177 1513 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFSF4P23510 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TNFSF4P23510 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TNFSF4P23510 SNORD116-2-201ENST00000384274 95 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 SNORD116-6-201ENST00000384711 96 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC016769.3-201ENST00000396562 315 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 MIR1250-201ENST00000408098 113 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.79□□□□□ -1.64
TNFSF4P23510 BMS1P17-202ENST00000416720 316 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AL662874.1-201ENST00000426065 230 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC005033.1-201ENST00000428904 813 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 TMX2P1-201ENST00000436507 708 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFSF4P23510 TPT1P13-201ENST00000449760 499 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AL136126.1-201ENST00000473603 402 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 RPL30P6-201ENST00000475925 342 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFSF4P23510 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFSF4P23510 HMGN2P25-201ENST00000486956 268 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC090638.1-201ENST00000498296 909 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC108941.1-201ENST00000502853 530 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC093767.1-201ENST00000504523 156 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFSF4P23510 AC111000.2-201ENST00000507775 550 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.79□□□□□ -1.64
TNFSF4P23510 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
TNFSF4P23510 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.79□□□□□ -1.64
TNFSF4P23510 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.79□□□□□ -1.64
TNFSF4P23510 PDCD5P1-201ENST00000543528 309 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.79□□□□□ -1.64
TNFSF4P23510 MIR5186-201ENST00000577504 120 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 OR4G1P-201ENST00000588632 938 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.79□□□□□ -1.64
TNFSF4P23510 AC020914.6-201ENST00000594327 272 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC013444.2-201ENST00000603317 787 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC083899.3-201ENST00000603413 594 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC121247.2-201ENST00000604776 136 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC080013.4-201ENST00000607624 649 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC122133.1-201ENST00000613964 233 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC048344.4-201ENST00000619744 527 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC026422.1-201ENST00000623961 452 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 AC079228.1-201ENST00000624774 1049 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 CYP3A51P-201ENST00000633513 256 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 MIR4302-201ENST00000638058 60 ntBASIC4.79□□□□□ -1.64
TNFSF4P23510 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TNFSF4P23510 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TNFSF4P23510 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
TNFSF4P23510 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TNFSF4P23510 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.79□□□□□ -1.64
TNFSF4P23510 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms