Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.24□□□□□ -1.73
XRCC1P18887 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.24□□□□□ -1.73
XRCC1P18887 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.24□□□□□ -1.73
XRCC1P18887 AL049844.2-201ENST00000604280 628 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 MIR432-201ENST00000606207 94 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 AC012603.1-201ENST00000606424 528 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 CR589904.2-201ENST00000612533 440 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 AL021997.2-201ENST00000615674 271 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 AC003001.2-201ENST00000616294 831 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 OR52H1-202ENST00000641796 1061 ntBASIC4.24□□□□□ -1.73
XRCC1P18887 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.24□□□□□ -1.73
XRCC1P18887 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
XRCC1P18887 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
XRCC1P18887 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 RNA5SP388-201ENST00000362584 119 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 RNA5SP175-201ENST00000364275 119 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 RNU6-40P-201ENST00000384254 107 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 RNA5SP306-201ENST00000411087 107 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.23□□□□□ -1.73
XRCC1P18887 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 ZFAND6P1-201ENST00000434138 605 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.23□□□□□ -1.73
XRCC1P18887 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 RPL21P133-201ENST00000443666 476 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 RPS15AP29-201ENST00000445539 400 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 ABCF2P2-201ENST00000450549 296 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 CLIC4P1-201ENST00000453177 535 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AL354710.1-201ENST00000453641 246 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AL121877.1-201ENST00000453704 622 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.23□□□□□ -1.73
XRCC1P18887 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
XRCC1P18887 AC105137.1-201ENST00000484355 562 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AC041039.1-201ENST00000485656 536 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 RNU6-1308P-201ENST00000516817 103 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AP003730.1-201ENST00000524605 285 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.23□□□□□ -1.73
XRCC1P18887 PHBP17-201ENST00000528576 541 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 UBTFL9-201ENST00000534504 1148 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.23□□□□□ -1.73
XRCC1P18887 SNRPGP1-201ENST00000553864 222 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 AL731537.2-201ENST00000561565 951 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.23□□□□□ -1.73
XRCC1P18887 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 AC015849.2-201ENST00000605738 409 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.23□□□□□ -1.73
XRCC1P18887 AL354696.1-201ENST00000614652 497 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.23□□□□□ -1.73
XRCC1P18887 AP003497.2-201ENST00000624220 967 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.23□□□□□ -1.73
XRCC1P18887 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 AL158163.1-201ENST00000603915 1649 ntBASIC4.23□□□□□ -1.73
XRCC1P18887 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.23□□□□□ -1.73
XRCC1P18887 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
XRCC1P18887 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
XRCC1P18887 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.22□□□□□ -1.73
XRCC1P18887 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.22□□□□□ -1.73
XRCC1P18887 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
XRCC1P18887 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
XRCC1P18887 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.22□□□□□ -1.73
XRCC1P18887 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.22□□□□□ -1.73
XRCC1P18887 SNORD51.1-201ENST00000365405 77 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.22□□□□□ -1.73
XRCC1P18887 GCNT6-201ENST00000379591 934 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
XRCC1P18887 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
XRCC1P18887 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
XRCC1P18887 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 EIF1P3-201ENST00000423841 334 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 AL157831.1-201ENST00000426134 473 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 ZNF965P-201ENST00000432501 817 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.22□□□□□ -1.73
XRCC1P18887 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.22□□□□□ -1.73
XRCC1P18887 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.22□□□□□ -1.73
XRCC1P18887 AC104306.1-201ENST00000449702 371 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 AC133473.1-201ENST00000455173 299 ntBASIC4.22□□□□□ -1.73
XRCC1P18887 RPL35AP15-201ENST00000468042 339 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms