| MUC1 | P15941 | CEP290-202 | ENST00000397838 | 2421 nt | TSL 5 BASIC | 3.58 | □□□□□ -1.84 | | |
| MUC1 | P15941 | UTRN-204 | ENST00000367545 | 12339 nt | APPRIS P1 TSL 5 BASIC | 3.58 | □□□□□ -1.84 | | |
| MUC1 | P15941 | HDX-202 | ENST00000373177 | 2924 nt | APPRIS P1 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | PHF20L1-210 | ENST00000395390 | 5900 nt | TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL445437.1-201 | ENST00000623157 | 3087 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MBD5-202 | ENST00000407073 | 9512 nt | TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MCF2-210 | ENST00000536274 | 3461 nt | APPRIS ALT2 TSL 2 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | ADGRL4-201 | ENST00000370742 | 3527 nt | APPRIS P1 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC02232-201 | ENST00000509932 | 4079 nt | TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | R3HDM1-220 | ENST00000628915 | 4325 nt | TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | GLIPR1-201 | ENST00000266659 | 5877 nt | APPRIS P1 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MS4A14-201 | ENST00000300187 | 2997 nt | APPRIS P3 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MME-201 | ENST00000360490 | 2360 nt | APPRIS P1 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | C1orf105-201 | ENST00000367725 | 888 nt | TSL 2 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL607077.1-201 | ENST00000401718 | 499 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RN7SKP235-201 | ENST00000410662 | 305 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC016397.1-201 | ENST00000412463 | 242 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC098592.2-201 | ENST00000413158 | 265 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC01614-201 | ENST00000415479 | 648 nt | TSL 2 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL138828.1-203 | ENST00000419926 | 1570 nt | TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MYCBP2-AS1-201 | ENST00000422231 | 519 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MTCO1P54-201 | ENST00000430139 | 712 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC00280-201 | ENST00000439525 | 448 nt | TSL 2 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LRRC9-202 | ENST00000445360 | 4717 nt | APPRIS P1 TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | Z99916.1-201 | ENST00000454253 | 482 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | ANP32BP2-201 | ENST00000454525 | 545 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL445524.1-204 | ENST00000454631 | 458 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RPL7L1P8-201 | ENST00000469911 | 741 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | PPIAP15-201 | ENST00000479662 | 484 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RN7SL691P-201 | ENST00000494487 | 301 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | CEACAMP10-202 | ENST00000495431 | 496 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RPL7P47-201 | ENST00000497299 | 556 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TIFA-202 | ENST00000500655 | 769 nt | APPRIS P1 TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC019133.1-201 | ENST00000508292 | 420 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | NOL8P1-201 | ENST00000508336 | 3529 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC109458.1-201 | ENST00000508858 | 316 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC008958.1-201 | ENST00000511047 | 682 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | NDUFB4P9-201 | ENST00000511646 | 388 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | SLIT2-IT1-201 | ENST00000515882 | 601 nt | TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNA5SP49-201 | ENST00000516450 | 115 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC090541.1-201 | ENST00000519803 | 467 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | PTPN22-207 | ENST00000528414 | 3424 nt | TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TRAV8-5-201 | ENST00000537369 | 341 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC064805.2-201 | ENST00000582959 | 523 nt | TSL 4 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | FAM60CP-201 | ENST00000591086 | 664 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | CEACAM7-204 | ENST00000602225 | 524 nt | TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | Z82195.1-201 | ENST00000604558 | 398 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL355512.1-201 | ENST00000609514 | 488 nt | TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC02266-201 | ENST00000610239 | 1151 nt | TSL 3 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | SLC38A2-214 | ENST00000612232 | 1221 nt | TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC114781.5-201 | ENST00000615297 | 108 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL158062.1-201 | ENST00000619632 | 745 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | ATP13A5-205 | ENST00000620313 | 709 nt | TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | THRA1/BTR-204 | ENST00000621191 | 513 nt | TSL 5 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MIR7702-201 | ENST00000621931 | 59 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC008785.1-201 | ENST00000624475 | 456 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MRPL42-206 | ENST00000549982 | 15582 nt | APPRIS P2 TSL 1 (best) BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | ZNF345-214 | ENST00000612719 | 2938 nt | APPRIS P1 TSL 4 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | FAM19A2-215 | ENST00000551619 | 2718 nt | APPRIS P1 TSL 2 BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AP000756.2-201 | ENST00000624168 | 2567 nt | BASIC | 3.57 | □□□□□ -1.84 | | |
| MUC1 | P15941 | EFHC1-205 | ENST00000538167 | 5308 nt | TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TBC1D31-210 | ENST00000521676 | 3256 nt | TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC100871.1-201 | ENST00000507871 | 1456 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC123767.1-201 | ENST00000519537 | 1439 nt | TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC084357.3-201 | ENST00000541353 | 2751 nt | TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RPS4XP5-202 | ENST00000449995 | 1334 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | OR51F2-201 | ENST00000322110 | 993 nt | APPRIS ALT2 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNU6-386P-201 | ENST00000362650 | 107 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNA5SP443-201 | ENST00000363083 | 132 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNU1-132P-201 | ENST00000364300 | 164 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC083799.1-201 | ENST00000366451 | 910 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | C1orf194-204 | ENST00000369949 | 731 nt | TSL 2 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNA5SP36-201 | ENST00000410197 | 133 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | ZNF92P1Y-201 | ENST00000415010 | 1191 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TRAPPC2P10-201 | ENST00000415662 | 323 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC104462.2-201 | ENST00000418402 | 271 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MFSD13B-201 | ENST00000420133 | 1290 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL365396.1-201 | ENST00000430854 | 671 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC073143.1-201 | ENST00000436316 | 395 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL138799.2-201 | ENST00000439024 | 343 nt | TSL 2 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RPL23AP89-201 | ENST00000439324 | 255 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TPTE2P3-201 | ENST00000441562 | 1189 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC01307-202 | ENST00000444327 | 771 nt | TSL 2 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC079354.3-201 | ENST00000447111 | 311 nt | TSL 2 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | SDCBP-205 | ENST00000447267 | 772 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | UQCRHP4-201 | ENST00000471686 | 272 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RPS29P19-201 | ENST00000479709 | 171 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC091167.1-201 | ENST00000492017 | 396 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC010425.1-201 | ENST00000511734 | 554 nt | TSL 4 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | LINC00500-201 | ENST00000515860 | 539 nt | TSL 4 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | RNA5SP143-201 | ENST00000516936 | 115 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TRAPPC2P2-201 | ENST00000517589 | 409 nt | BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | CARD8-211 | ENST00000519332 | 500 nt | TSL 1 (best) BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC068672.1-201 | ENST00000520391 | 328 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AC115837.2-201 | ENST00000522127 | 677 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | PIH1D2-208 | ENST00000532211 | 1103 nt | APPRIS P1 TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | SPTY2D1-AS1-203 | ENST00000542172 | 331 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | MED6-207 | ENST00000554963 | 975 nt | APPRIS ALT1 TSL 5 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | AL358333.1-201 | ENST00000555115 | 467 nt | TSL 3 BASIC | 3.56 | □□□□□ -1.84 | | |
| MUC1 | P15941 | TVP23BP1-201 | ENST00000557500 | 617 nt | BASIC | 3.56 | □□□□□ -1.84 | | |