Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AL627224.1-201ENST00000448334 444 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AC108463.1-201ENST00000450258 347 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AL162388.1-201ENST00000450912 352 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 RPL5P13-201ENST00000462840 709 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD4P09016 AC021087.2-201ENST00000504656 1203 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD4P09016 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD4P09016 UBTFL9-201ENST00000534504 1148 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD4P09016 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.13□□□□□ -1.75
HOXD4P09016 FKBP1BP1-201ENST00000553366 325 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD4P09016 AC068831.4-201ENST00000556118 109 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.13□□□□□ -1.75
HOXD4P09016 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD4P09016 AL121834.1-201ENST00000572284 509 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD4P09016 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.13□□□□□ -1.75
HOXD4P09016 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.13□□□□□ -1.75
HOXD4P09016 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD4P09016 AC010857.1-201ENST00000606398 594 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AF129408.1-201ENST00000608767 431 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD4P09016 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.13□□□□□ -1.75
HOXD4P09016 AL121890.3-201ENST00000618494 516 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD4P09016 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD4P09016 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD4P09016 AL031119.1-201ENST00000404707 1879 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD4P09016 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.13□□□□□ -1.75
HOXD4P09016 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
HOXD4P09016 AC007390.2-201ENST00000606229 3803 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 CCT8P1-201ENST00000413611 1657 ntBASIC4.13□□□□□ -1.75
HOXD4P09016 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD4P09016 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 BX005019.1-201ENST00000561881 1810 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 MAPK10-253ENST00000641010 4072 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 RNU6-225P-201ENST00000384613 103 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD4P09016 RN7SKP263-201ENST00000411194 309 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 EIF4HP2-201ENST00000424380 563 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 NANOGP6-201ENST00000429190 847 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 DYNLL1P7-201ENST00000429273 258 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD4P09016 PTP4A1P3-201ENST00000433661 420 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD4P09016 RPL7P33-201ENST00000444159 742 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 MOB1AP2-201ENST00000446060 614 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 AC104651.2-201ENST00000447549 528 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD4P09016 AC243772.1-201ENST00000451620 410 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 CLIC4P1-201ENST00000453177 535 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 TVP23BP2-201ENST00000455082 615 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD4P09016 RN7SL810P-201ENST00000493031 276 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 NAMPTP2-201ENST00000505629 1115 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD4P09016 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
HOXD4P09016 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD4P09016 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD4P09016 AC105129.1-201ENST00000560250 297 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 AC007224.1-201ENST00000564410 144 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 AC021483.2-201ENST00000567415 758 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD4P09016 MIR3939-201ENST00000582614 106 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.12□□□□□ -1.75
HOXD4P09016 MIR4760-201ENST00000585040 80 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 AC245884.10-201ENST00000597355 337 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 RPAP2P1-201ENST00000603626 1168 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.12□□□□□ -1.75
HOXD4P09016 AC022960.3-201ENST00000619794 441 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
HOXD4P09016 AC145207.9-201ENST00000623802 325 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.12□□□□□ -1.75
HOXD4P09016 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
HOXD4P09016 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.12□□□□□ -1.75
HOXD4P09016 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 RAD17P1-201ENST00000418130 2042 ntBASIC4.12□□□□□ -1.75
HOXD4P09016 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
HOXD4P09016 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
HOXD4P09016 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HOXD4P09016 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD4P09016 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD4P09016 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD4P09016 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
HOXD4P09016 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD4P09016 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.11□□□□□ -1.75
HOXD4P09016 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms