Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.59□□□□□ -1.84
SPTA1P02549 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.59□□□□□ -1.84
SPTA1P02549 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.59□□□□□ -1.84
SPTA1P02549 AC020914.6-201ENST00000594327 272 ntBASIC3.59□□□□□ -1.84
SPTA1P02549 AL451044.1-201ENST00000604867 238 ntBASIC3.59□□□□□ -1.84
SPTA1P02549 AC005344.1-201ENST00000613391 459 ntBASIC3.59□□□□□ -1.84
SPTA1P02549 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
SPTA1P02549 FRG1EP-201ENST00000634469 770 ntBASIC3.59□□□□□ -1.84
SPTA1P02549 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.59□□□□□ -1.84
SPTA1P02549 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3.59□□□□□ -1.84
SPTA1P02549 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SPTA1P02549 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SPTA1P02549 EOGT-210ENST00000615922 1931 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SPTA1P02549 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SPTA1P02549 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC3.58□□□□□ -1.84
SPTA1P02549 AL080315.1-201ENST00000406055 466 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 RNA5SP293-201ENST00000410527 113 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.58□□□□□ -1.84
SPTA1P02549 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.58□□□□□ -1.84
SPTA1P02549 UBTFL3-201ENST00000418934 1024 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 RPL21P91-201ENST00000429231 479 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.58□□□□□ -1.84
SPTA1P02549 RPL27AP5-201ENST00000469428 449 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 UBTFL6-201ENST00000477929 1024 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 RPL32P34-201ENST00000486380 400 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AC012493.2-201ENST00000595083 291 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AC006023.1-201ENST00000603944 259 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 PCA3_2.1-201ENST00000612507 409 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AC073530.2-201ENST00000623987 261 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.58□□□□□ -1.84
SPTA1P02549 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.58□□□□□ -1.84
SPTA1P02549 AC074029.4-201ENST00000624796 1859 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC3.58□□□□□ -1.84
SPTA1P02549 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.58□□□□□ -1.84
SPTA1P02549 AL133383.2-201ENST00000622958 2336 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SPTA1P02549 AP001284.1-201ENST00000528393 2118 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AL672167.1-204ENST00000641875 3017 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SPTA1P02549 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.58□□□□□ -1.84
SPTA1P02549 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SPTA1P02549 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SPTA1P02549 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SPTA1P02549 MIR921-201ENST00000401133 56 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 RBMY1KP-201ENST00000423480 476 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.58□□□□□ -1.84
SPTA1P02549 RPL5P2-201ENST00000429598 854 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.58□□□□□ -1.84
SPTA1P02549 RPL21P23-201ENST00000446654 460 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 BX276092.4-201ENST00000452056 248 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 RPL21P11-201ENST00000461458 483 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 RFPL4AP5-201ENST00000514977 504 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 RNA5SP179-201ENST00000517284 121 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.58□□□□□ -1.84
SPTA1P02549 AC091516.1-201ENST00000549191 703 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AC006960.3-201ENST00000561845 705 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.58□□□□□ -1.84
SPTA1P02549 AL160290.3-201ENST00000604869 165 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 AP005264.7-201ENST00000625003 745 ntBASIC3.58□□□□□ -1.84
SPTA1P02549 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 RNA5SP97-201ENST00000365006 84 ntBASIC3.57□□□□□ -1.84
SPTA1P02549 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.57□□□□□ -1.84
SPTA1P02549 SOD2P1-201ENST00000396543 562 ntBASIC3.57□□□□□ -1.84
SPTA1P02549 SNORA74C-2-201ENST00000411179 201 ntBASIC3.57□□□□□ -1.84
SPTA1P02549 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC3.57□□□□□ -1.84
SPTA1P02549 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.57□□□□□ -1.84
SPTA1P02549 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.57□□□□□ -1.84
SPTA1P02549 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.57□□□□□ -1.84
SPTA1P02549 FCF1P7-201ENST00000451185 558 ntBASIC3.57□□□□□ -1.84
SPTA1P02549 AC008155.2-201ENST00000464337 397 ntBASIC3.57□□□□□ -1.84
SPTA1P02549 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.57□□□□□ -1.84
SPTA1P02549 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
SPTA1P02549 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.57□□□□□ -1.84
SPTA1P02549 MIR7112-201ENST00000616126 65 ntBASIC3.57□□□□□ -1.84
SPTA1P02549 AC023509.5-201ENST00000617434 807 ntBASIC3.57□□□□□ -1.84
SPTA1P02549 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.57□□□□□ -1.84
SPTA1P02549 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.57□□□□□ -1.84
SPTA1P02549 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.57□□□□□ -1.84
SPTA1P02549 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.57□□□□□ -1.84
SPTA1P02549 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SPTA1P02549 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SPTA1P02549 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SPTA1P02549 RNU1-33P-201ENST00000364249 162 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 SNORD66.1-201ENST00000391230 76 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.56□□□□□ -1.84
SPTA1P02549 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.56□□□□□ -1.84
SPTA1P02549 AL671855.1-201ENST00000446875 1203 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 RPL7P1-201ENST00000468161 747 ntBASIC3.56□□□□□ -1.84
SPTA1P02549 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.56□□□□□ -1.84
SPTA1P02549 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC3.56□□□□□ -1.84
SPTA1P02549 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms