Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL2A1P02458 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.7□□□□□ -1.66
COL2A1P02458 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL2A1P02458 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 OR6K3-202ENST00000368146 996 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 MIR34B-201ENST00000385076 84 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 SNORA57.3-201ENST00000411095 141 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.69□□□□□ -1.66
COL2A1P02458 Z97055.1-201ENST00000419730 712 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.69□□□□□ -1.66
COL2A1P02458 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.69□□□□□ -1.66
COL2A1P02458 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.69□□□□□ -1.66
COL2A1P02458 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 AC005008.1-201ENST00000456151 612 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 GAPDHP36-201ENST00000480688 918 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 RN7SL323P-201ENST00000494712 295 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.69□□□□□ -1.66
COL2A1P02458 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.69□□□□□ -1.66
COL2A1P02458 AC026407.1-201ENST00000518369 204 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AC007991.1-201ENST00000522680 631 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.69□□□□□ -1.66
COL2A1P02458 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.69□□□□□ -1.66
COL2A1P02458 AC079171.1-201ENST00000568788 914 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AC005412.1-201ENST00000580812 1049 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AC063944.3-201ENST00000609969 533 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
COL2A1P02458 AC090246.1-201ENST00000616499 426 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.69□□□□□ -1.66
COL2A1P02458 AC023510.2-201ENST00000622162 746 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.69□□□□□ -1.66
COL2A1P02458 MTCO1P46-201ENST00000451639 1491 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.69□□□□□ -1.66
COL2A1P02458 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
COL2A1P02458 SNORD35B-201ENST00000363660 87 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 MIR199A2-201ENST00000385289 110 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AC007068.1-201ENST00000396690 844 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.69□□□□□ -1.66
COL2A1P02458 DYNLL1P7-201ENST00000429273 258 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AL500527.1-201ENST00000448532 255 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 TPRKBP1-201ENST00000456243 481 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.69□□□□□ -1.66
COL2A1P02458 ACTR3P3-201ENST00000480448 893 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 MTND3P6-201ENST00000485242 339 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.69□□□□□ -1.66
COL2A1P02458 AC110760.3-202ENST00000515177 371 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 SCARNA14-201ENST00000516903 136 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 RNU6-467P-201ENST00000517027 110 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.69□□□□□ -1.66
COL2A1P02458 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.69□□□□□ -1.66
COL2A1P02458 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.69□□□□□ -1.66
COL2A1P02458 AC022146.1-201ENST00000595307 847 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AC015726.1-201ENST00000602353 681 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 AC091167.4-201ENST00000605079 184 ntBASIC4.69□□□□□ -1.66
COL2A1P02458 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.69□□□□□ -1.66
COL2A1P02458 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.69□□□□□ -1.66
COL2A1P02458 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.69□□□□□ -1.66
COL2A1P02458 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
COL2A1P02458 FAM91A3P-201ENST00000456826 2544 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL2A1P02458 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL2A1P02458 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.68□□□□□ -1.66
COL2A1P02458 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
COL2A1P02458 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
COL2A1P02458 MIR183-201ENST00000384958 110 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL2A1P02458 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL2A1P02458 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.68□□□□□ -1.66
COL2A1P02458 NPM1P34-201ENST00000428821 893 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.68□□□□□ -1.66
COL2A1P02458 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.68□□□□□ -1.66
COL2A1P02458 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL2A1P02458 AL513343.1-201ENST00000451818 792 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.68□□□□□ -1.66
COL2A1P02458 MTND2P3-201ENST00000452458 470 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.68□□□□□ -1.66
COL2A1P02458 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.68□□□□□ -1.66
COL2A1P02458 PLGLA-201ENST00000465668 449 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.68□□□□□ -1.66
COL2A1P02458 OR5M7P-201ENST00000526140 972 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.68□□□□□ -1.66
COL2A1P02458 BNIP3P40-201ENST00000596017 556 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 AC005344.1-201ENST00000613391 459 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 AL354950.1-201ENST00000614150 568 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 AL121890.2-201ENST00000617644 465 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL2A1P02458 MIR7154-201ENST00000620673 73 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL2A1P02458 AC073530.2-201ENST00000623987 261 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 AC024023.1-201ENST00000624530 922 ntBASIC4.68□□□□□ -1.66
COL2A1P02458 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.68□□□□□ -1.66
COL2A1P02458 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
COL2A1P02458 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms