Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MTND1P31-201ENST00000449206 961 ntBASIC4.58□□□□□ -1.68
LDLRP01130 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.58□□□□□ -1.68
LDLRP01130 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.58□□□□□ -1.68
LDLRP01130 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.58□□□□□ -1.68
LDLRP01130 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.58□□□□□ -1.68
LDLRP01130 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.58□□□□□ -1.68
LDLRP01130 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.58□□□□□ -1.68
LDLRP01130 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.58□□□□□ -1.68
LDLRP01130 AC091057.3-201ENST00000602684 733 ntBASIC4.58□□□□□ -1.68
LDLRP01130 AC025811.1-201ENST00000604312 472 ntBASIC4.58□□□□□ -1.68
LDLRP01130 AC009974.1-201ENST00000608881 455 ntBASIC4.58□□□□□ -1.68
LDLRP01130 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.58□□□□□ -1.68
LDLRP01130 Z99129.2-201ENST00000619967 314 ntBASIC4.58□□□□□ -1.68
LDLRP01130 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.58□□□□□ -1.68
LDLRP01130 AL359757.1-201ENST00000623176 255 ntBASIC4.58□□□□□ -1.68
LDLRP01130 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
LDLRP01130 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
LDLRP01130 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LDLRP01130 AC010329.2-201ENST00000595195 2737 ntBASIC4.58□□□□□ -1.68
LDLRP01130 AC090017.1-201ENST00000548612 1779 ntBASIC4.58□□□□□ -1.68
LDLRP01130 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
LDLRP01130 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 GTF2H2B-203ENST00000508065 1432 ntBASIC4.57□□□□□ -1.68
LDLRP01130 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.57□□□□□ -1.68
LDLRP01130 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LDLRP01130 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LDLRP01130 MAPK10-304ENST00000641341 3984 ntBASIC4.57□□□□□ -1.68
LDLRP01130 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LDLRP01130 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LDLRP01130 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LDLRP01130 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LDLRP01130 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 RN7SKP114-201ENST00000410327 279 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC013404.1-201ENST00000413068 249 ntBASIC4.57□□□□□ -1.68
LDLRP01130 HMGB3P31-201ENST00000413333 595 ntBASIC4.57□□□□□ -1.68
LDLRP01130 UBE2V1P9-201ENST00000414760 368 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC004690.1-201ENST00000418216 328 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC004448.2-201ENST00000422360 586 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.57□□□□□ -1.68
LDLRP01130 AC093422.3-201ENST00000428506 305 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC007559.1-201ENST00000428736 355 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC114973.1-201ENST00000429057 632 ntBASIC4.57□□□□□ -1.68
LDLRP01130 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.57□□□□□ -1.68
LDLRP01130 AC092447.2-201ENST00000435487 669 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.57□□□□□ -1.68
LDLRP01130 AL357520.1-201ENST00000441557 453 ntBASIC4.57□□□□□ -1.68
LDLRP01130 RPL36AP15-201ENST00000444514 266 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AL354710.1-201ENST00000453641 246 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.57□□□□□ -1.68
LDLRP01130 AC008280.2-201ENST00000455473 307 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.57□□□□□ -1.68
LDLRP01130 RPL5P23-201ENST00000496040 868 ntBASIC4.57□□□□□ -1.68
LDLRP01130 GAPDHP56-201ENST00000506031 988 ntBASIC4.57□□□□□ -1.68
LDLRP01130 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.57□□□□□ -1.68
LDLRP01130 STMN1P2-201ENST00000508435 439 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 PGBD4P4-201ENST00000509673 613 ntBASIC4.57□□□□□ -1.68
LDLRP01130 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.57□□□□□ -1.68
LDLRP01130 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.57□□□□□ -1.68
LDLRP01130 MTND2P32-201ENST00000521584 1038 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.57□□□□□ -1.68
LDLRP01130 AC118942.1-201ENST00000529674 1035 ntBASIC4.57□□□□□ -1.68
LDLRP01130 PDCD5P1-201ENST00000543528 309 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.57□□□□□ -1.68
LDLRP01130 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.57□□□□□ -1.68
LDLRP01130 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.57□□□□□ -1.68
LDLRP01130 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.57□□□□□ -1.68
LDLRP01130 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.57□□□□□ -1.68
LDLRP01130 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 RN7SL176P-201ENST00000580352 264 ntBASIC4.57□□□□□ -1.68
LDLRP01130 RN7SL339P-201ENST00000580597 296 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LDLRP01130 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 AC069431.2-201ENST00000604149 1099 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AL445423.1-201ENST00000609941 536 ntBASIC4.57□□□□□ -1.68
LDLRP01130 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LDLRP01130 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
LDLRP01130 AL445487.1-201ENST00000415694 1580 ntBASIC4.57□□□□□ -1.68
LDLRP01130 ECM1P2-201ENST00000503354 1577 ntBASIC4.57□□□□□ -1.68
LDLRP01130 AL451142.2-201ENST00000429076 2090 ntBASIC4.57□□□□□ -1.68
LDLRP01130 MAPK10-286ENST00000641208 8747 ntBASIC4.57□□□□□ -1.68
LDLRP01130 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LDLRP01130 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 EOGT-210ENST00000615922 1931 ntBASIC4.56□□□□□ -1.68
LDLRP01130 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.56□□□□□ -1.68
LDLRP01130 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LDLRP01130 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.56□□□□□ -1.68
LDLRP01130 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.56□□□□□ -1.68
LDLRP01130 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LDLRP01130 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LDLRP01130 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 358.6 ms