Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
UPK1AO00322 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1AO00322 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
UPK1AO00322 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UPK1AO00322 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UPK1AO00322 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
UPK1AO00322 ATP5F1P4-201ENST00000397288 746 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UPK1AO00322 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1AO00322 AC016397.1-201ENST00000412463 242 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 TPT1P2-201ENST00000413105 503 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.77□□□□□ -1.81
UPK1AO00322 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1AO00322 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.77□□□□□ -1.81
UPK1AO00322 RPS26P40-201ENST00000435209 294 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 AL356276.2-201ENST00000435919 558 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 RAB28P3-201ENST00000448325 597 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 AL500522.2-201ENST00000448562 343 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 AC009220.1-201ENST00000451614 275 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 AC022336.1-201ENST00000475510 337 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 STRADBP1-201ENST00000478954 1281 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 AC026979.1-201ENST00000492525 396 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1AO00322 HPRT1P1-201ENST00000509498 657 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.77□□□□□ -1.81
UPK1AO00322 AC026726.1-201ENST00000512859 601 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 RNU6-319P-201ENST00000516025 108 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 SNORA31.9-201ENST00000516429 84 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.77□□□□□ -1.81
UPK1AO00322 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.77□□□□□ -1.81
UPK1AO00322 AC138701.1-201ENST00000524329 714 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1AO00322 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.77□□□□□ -1.81
UPK1AO00322 AF230666.2-201ENST00000602328 725 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 AL390816.3-201ENST00000604527 1066 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UPK1AO00322 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.77□□□□□ -1.81
UPK1AO00322 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
UPK1AO00322 AC093535.2-201ENST00000624769 2326 ntBASIC3.77□□□□□ -1.81
UPK1AO00322 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
UPK1AO00322 RNU6-178P-201ENST00000384631 104 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 MIR3074-201ENST00000384885 81 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 ENSAP1-201ENST00000392855 326 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.76□□□□□ -1.81
UPK1AO00322 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.76□□□□□ -1.81
UPK1AO00322 RCC2P2-201ENST00000422174 918 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.76□□□□□ -1.81
UPK1AO00322 AL121578.1-201ENST00000428051 892 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.76□□□□□ -1.81
UPK1AO00322 RPL7P28-201ENST00000437739 740 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 AP000936.3-201ENST00000438127 255 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.76□□□□□ -1.81
UPK1AO00322 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.76□□□□□ -1.81
UPK1AO00322 FABP3P2-201ENST00000453169 399 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.76□□□□□ -1.81
UPK1AO00322 RPL10P17-201ENST00000453852 316 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.76□□□□□ -1.81
UPK1AO00322 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 IGBP1P5-201ENST00000507524 1000 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 AC018797.3-201ENST00000513388 1241 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 snoU109.6-201ENST00000516831 118 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.76□□□□□ -1.81
UPK1AO00322 VTA1P2-201ENST00000520205 911 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.76□□□□□ -1.81
UPK1AO00322 AC025884.1-201ENST00000556034 378 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.76□□□□□ -1.81
UPK1AO00322 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.76□□□□□ -1.81
UPK1AO00322 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.76□□□□□ -1.81
UPK1AO00322 MIR6716-201ENST00000613413 80 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 MIR6758-201ENST00000620653 63 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 AC244205.2-202ENST00000635781 342 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 MIR6830-201ENST00000636015 70 ntBASIC3.76□□□□□ -1.81
UPK1AO00322 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
UPK1AO00322 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
UPK1AO00322 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.76□□□□□ -1.81
UPK1AO00322 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
UPK1AO00322 HSPA8P1-201ENST00000425843 1833 ntBASIC3.75□□□□□ -1.81
UPK1AO00322 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
UPK1AO00322 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.75□□□□□ -1.81
UPK1AO00322 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
UPK1AO00322 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
UPK1AO00322 RNU4-7P-201ENST00000364758 141 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms