Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 RPL12P18-201ENST00000437175 325 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 RPL21P10-201ENST00000463521 490 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 RPS27AP1-201ENST00000475545 471 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 MIR4433B-201ENST00000581329 102 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 RPL23AP57-201ENST00000332361 466 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 AC006511.1-201ENST00000470614 315 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 FTH1P9-201ENST00000513251 355 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 EIF4BP1-201ENST00000554881 351 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.88□□□□□ -1.63
RGPD3A6NKT7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RGPD3A6NKT7 AC010300.1-201ENST00000600671 5134 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 EOGT-210ENST00000615922 1931 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 UBA52P6-201ENST00000399822 382 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 USP9YP36-201ENST00000424581 829 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 USP9YP31-201ENST00000431405 881 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 RN7SL271P-201ENST00000487601 295 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 AC008759.1-201ENST00000589783 983 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 AC133552.5-201ENST00000604266 540 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 YPEL5P2-201ENST00000605553 359 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 SNORD91B-202ENST00000608459 222 ntBASIC4.87□□□□□ -1.63
RGPD3A6NKT7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
RGPD3A6NKT7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AL157762.1-201ENST00000619612 415 ntBASIC4.86□□□□□ -1.63
RGPD3A6NKT7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC004656.1-201ENST00000568479 4951 ntBASIC4.86□□□□□ -1.63
RGPD3A6NKT7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 RPS23P10-201ENST00000416185 486 ntBASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC096644.3-201ENST00000416788 338 ntBASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC087650.1-201ENST00000431445 468 ntBASIC4.86□□□□□ -1.63
RGPD3A6NKT7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 SETD6P1-201ENST00000444575 317 ntBASIC4.86□□□□□ -1.63
RGPD3A6NKT7 RBMY2UP-201ENST00000453474 324 ntBASIC4.86□□□□□ -1.63
RGPD3A6NKT7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 AC125494.3-201ENST00000602759 455 ntBASIC4.86□□□□□ -1.63
RGPD3A6NKT7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RGPD3A6NKT7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 AC007823.1-201ENST00000569932 1566 ntBASIC4.85□□□□□ -1.63
RGPD3A6NKT7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 RN7SKP97-201ENST00000410966 333 ntBASIC4.85□□□□□ -1.63
RGPD3A6NKT7 AC073063.1-201ENST00000434352 607 ntBASIC4.85□□□□□ -1.63
RGPD3A6NKT7 BTF3P5-201ENST00000457252 467 ntBASIC4.85□□□□□ -1.63
RGPD3A6NKT7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 AC023509.5-201ENST00000617434 807 ntBASIC4.85□□□□□ -1.63
RGPD3A6NKT7 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.85□□□□□ -1.63
RGPD3A6NKT7 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms