Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 SNORA58B-201ENST00000364259 136 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 RNU1-106P-201ENST00000384382 164 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 RNA5SP187-201ENST00000384400 119 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 RNY3P9-201ENST00000384727 106 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 LRRC37BP1-201ENST00000398851 714 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 ZNF603P-201ENST00000405613 487 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 U3.36-201ENST00000408418 213 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AL161722.2-201ENST00000434731 981 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 CLUHP1-201ENST00000435012 1190 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 MTND6P18-201ENST00000439477 513 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 NOP56P2-201ENST00000447491 769 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC104978.1-201ENST00000449387 391 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 GAPDHP14-201ENST00000450472 937 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC090602.1-201ENST00000469695 252 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 BX284632.1-201ENST00000478218 541 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC013828.1-201ENST00000481845 158 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 RPL32P9-201ENST00000487963 407 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC090071.1-201ENST00000507713 644 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC006427.1-201ENST00000514359 712 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 NPM1P6-201ENST00000521088 871 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 TRAV15-201ENST00000556680 249 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AP005119.2-201ENST00000579735 1105 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AL445222.1-201ENST00000607259 628 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC091932.2-201ENST00000623014 291 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 AC017037.3-201ENST00000625016 472 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 MTND2P41-201ENST00000637599 773 ntBASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.84□□□□□ -1.47
COL4A3BPQ9Y5P4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL4A3BPQ9Y5P4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.84□□□□□ -1.48
COL4A3BPQ9Y5P4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.84□□□□□ -1.48
COL4A3BPQ9Y5P4 AC092747.4-201ENST00000620519 1861 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 OR9K1P-202ENST00000641111 3217 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC004158.1-201ENST00000564508 4319 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AL592437.2-201ENST00000421655 2434 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 DDX18P3-201ENST00000404856 2007 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 MIR649-201ENST00000384843 97 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 MIR589-201ENST00000385238 99 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 OR8V1P-201ENST00000395193 873 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 RN7SKP199-201ENST00000410325 305 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 RN7SKP126-201ENST00000411143 300 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 RPL31P54-201ENST00000429803 370 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 RPL12P18-201ENST00000437175 325 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 CEACAMP9-201ENST00000442990 513 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 MTCO1P48-201ENST00000448024 1096 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC009127.1-201ENST00000467090 155 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 RN7SL189P-201ENST00000468631 289 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 RN7SL814P-201ENST00000487715 300 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 RN7SL808P-201ENST00000496066 299 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 GTF2F2P1-201ENST00000511083 675 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AP000926.4-201ENST00000527351 454 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 LSM6P2-201ENST00000552208 177 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 SULT1C2P1-202ENST00000562418 459 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC002400.1-201ENST00000569310 726 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 RN7SL708P-201ENST00000580952 299 ntBASIC5.83□□□□□ -1.48
COL4A3BPQ9Y5P4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms