Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.21□□□□□ -1.73
NDE1Q9NXR1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
NDE1Q9NXR1 CASC19-261ENST00000641853 1638 ntBASIC4.21□□□□□ -1.73
NDE1Q9NXR1 FAM35DP-201ENST00000323387 2712 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 FAM3C2-201ENST00000312214 681 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 RN7SKP95-201ENST00000362860 303 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 SNORA72.3-201ENST00000365074 132 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 RPL22P22-201ENST00000395439 379 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 RN7SKP278-201ENST00000410504 342 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AL161631.1-201ENST00000417933 486 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 RPS26P13-201ENST00000419030 330 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 RPS12P10-201ENST00000427031 377 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 NRBF2P3-201ENST00000432731 865 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AL049745.1-201ENST00000433953 286 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 RN7SL812P-201ENST00000493791 279 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 RN7SL808P-201ENST00000496066 299 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC008638.1-201ENST00000506035 866 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 MIR2114-201ENST00000516645 80 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 RN7SKP66-201ENST00000516681 231 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 IGKV2-18-201ENST00000522607 343 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC013701.1-201ENST00000522657 465 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AL352979.3-201ENST00000553515 247 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC090666.1-201ENST00000578241 445 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 SNORD39.2-201ENST00000579995 76 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC096947.1-201ENST00000603233 470 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC012557.1-201ENST00000607115 611 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC034229.4-201ENST00000607861 441 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 AC027449.1-201ENST00000608890 407 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 SDR42E1P1-201ENST00000611327 477 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NDE1Q9NXR1 OR11H5P-202ENST00000641612 1325 ntBASIC4.21□□□□□ -1.74
NDE1Q9NXR1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 RN7SKP162-201ENST00000363605 345 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 RNU6-244P-201ENST00000391028 104 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 ATF1P1-201ENST00000406040 927 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 MTATP6P31-201ENST00000406985 692 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC010385.1-201ENST00000412374 256 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 XKRYP4-201ENST00000414395 483 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC013262.1-201ENST00000426710 252 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 OR2B7P-201ENST00000429302 934 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 RPEP2-201ENST00000432149 701 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC006994.1-201ENST00000438212 839 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AF228730.2-201ENST00000438784 848 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AL035551.1-201ENST00000446931 348 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 XKRYP5-201ENST00000449659 483 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC109462.1-201ENST00000491087 368 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC108145.1-201ENST00000503770 153 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC018797.3-201ENST00000513388 1241 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC133963.2-201ENST00000513686 578 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 SCARNA1-201ENST00000517138 166 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 RN7SKP147-201ENST00000517154 244 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC109635.6-201ENST00000525487 1113 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.2□□□□□ -1.74
NDE1Q9NXR1 AP003066.2-201ENST00000529375 555 ntBASIC4.2□□□□□ -1.74
NDE1Q9NXR1 OR8X1P-201ENST00000534542 869 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms