Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 Y_RNA.148-201ENST00000363557 117 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-831P-201ENST00000384548 107 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RNA5SP176-201ENST00000390956 110 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AL359634.1-202ENST00000404721 284 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RNU2-50P-201ENST00000410494 143 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-272P-201ENST00000411028 104 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC073264.1-201ENST00000411508 416 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 CHEK2P3-201ENST00000416118 248 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 DUTP6-201ENST00000425573 462 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AL031681.1-201ENST00000443304 400 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 FAM103A2P-201ENST00000444122 354 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 HMGB3P22-202ENST00000451823 572 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 YWHAEP1-201ENST00000453697 763 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RPL10P17-201ENST00000453852 316 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RPL7P6-201ENST00000480903 738 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RNA5SP473-201ENST00000516402 125 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-347P-201ENST00000516658 105 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-388P-201ENST00000517012 105 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 RNU6-389P-201ENST00000517048 105 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AP003072.2-201ENST00000527756 676 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AP003181.2-201ENST00000528941 181 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AL389895.1-201ENST00000554127 252 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC010287.1-201ENST00000566916 357 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC099489.2-201ENST00000574976 260 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 APOOP1-201ENST00000604695 592 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AL035410.2-201ENST00000604963 864 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AL133216.2-202ENST00000634512 349 ntBASIC6.65□□□□□ -1.34
CUEDC1Q9NWM3 AC109780.1-201ENST00000451768 1344 ntBASIC6.65□□□□□ -1.35
CUEDC1Q9NWM3 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.65□□□□□ -1.35
CUEDC1Q9NWM3 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.65□□□□□ -1.35
CUEDC1Q9NWM3 AL512329.1-201ENST00000404600 1592 ntBASIC6.65□□□□□ -1.35
CUEDC1Q9NWM3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CUEDC1Q9NWM3 LPAL2-203ENST00000454031 2498 ntBASIC6.65□□□□□ -1.35
CUEDC1Q9NWM3 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CUEDC1Q9NWM3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
CUEDC1Q9NWM3 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.65□□□□□ -1.35
CUEDC1Q9NWM3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 ERCC6-202ENST00000374127 1782 ntBASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 TATDN2P3-201ENST00000452855 3665 ntBASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 SNORD116-23-201ENST00000384645 92 ntBASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 SNORD94-201ENST00000386037 137 ntBASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 RNU2-64P-201ENST00000411315 191 ntBASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AC104837.2-201ENST00000427236 424 ntBASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 SDAD1P3-201ENST00000427380 333 ntBASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.64□□□□□ -1.35
CUEDC1Q9NWM3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms