Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CHD8Q9HCK8 RNA5SP151-201ENST00000365632 117 ntBASIC3.71□□□□□ -1.81
CHD8Q9HCK8 ZNF602P-201ENST00000405929 924 ntBASIC3.71□□□□□ -1.81
CHD8Q9HCK8 RPL5P18-201ENST00000406671 891 ntBASIC3.71□□□□□ -1.81
CHD8Q9HCK8 MIR1287-201ENST00000408492 90 ntBASIC3.71□□□□□ -1.81
CHD8Q9HCK8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.71□□□□□ -1.81
CHD8Q9HCK8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.71□□□□□ -1.81
CHD8Q9HCK8 AL133162.1-201ENST00000463228 453 ntBASIC3.71□□□□□ -1.81
CHD8Q9HCK8 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.71□□□□□ -1.81
CHD8Q9HCK8 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC3.71□□□□□ -1.81
CHD8Q9HCK8 AC010149.2-201ENST00000637608 315 ntBASIC3.71□□□□□ -1.81
CHD8Q9HCK8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
CHD8Q9HCK8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC3.71□□□□□ -1.81
CHD8Q9HCK8 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.71□□□□□ -1.81
CHD8Q9HCK8 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.71□□□□□ -1.82
CHD8Q9HCK8 AC073508.1-201ENST00000428866 656 ntBASIC3.71□□□□□ -1.82
CHD8Q9HCK8 AC073063.1-201ENST00000434352 607 ntBASIC3.71□□□□□ -1.82
CHD8Q9HCK8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 AL355488.2-201ENST00000609909 2850 ntBASIC3.71□□□□□ -1.82
CHD8Q9HCK8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.71□□□□□ -1.82
CHD8Q9HCK8 NAMPTP1-201ENST00000440465 2514 ntBASIC3.71□□□□□ -1.82
CHD8Q9HCK8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 FAM133CP-201ENST00000332869 704 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 RNA5SP120-201ENST00000410900 112 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 BTF3P9-201ENST00000418784 283 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 AL009174.1-201ENST00000426577 416 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 MAPRE1P3-201ENST00000435438 796 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 TRIM60P18-201ENST00000441518 828 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 RPS4XP4-201ENST00000443195 763 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 AC023141.12-201ENST00000512399 199 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 RPL23AP92-201ENST00000603609 255 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 HSFY4P-201ENST00000415994 1181 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 UBE2V1P1-201ENST00000430836 445 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 AL513124.1-201ENST00000450410 614 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 RNA5SP446-201ENST00000515955 82 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 RNA5SP179-201ENST00000517284 121 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 AC005868.1-201ENST00000536421 331 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 AC022655.2-201ENST00000577280 318 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 BNIP3P8-201ENST00000597863 560 ntBASIC3.7□□□□□ -1.82
CHD8Q9HCK8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.7□□□□□ -1.82
CHD8Q9HCK8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 SNORA5B-201ENST00000363786 132 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AL161631.1-201ENST00000417933 486 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 TOMM20P4-201ENST00000427861 435 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AL158071.1-201ENST00000430315 461 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 NPM1P18-201ENST00000434232 732 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 CEACAMP1-201ENST00000434624 1035 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AC004938.1-201ENST00000438468 308 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AC090312.2-201ENST00000582687 378 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AC010201.1-201ENST00000605051 540 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 GMCL1P2-201ENST00000605230 823 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 AL353743.1-202ENST00000431724 1695 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CHD8Q9HCK8 SOD2P1-201ENST00000396543 562 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 RN7SKP97-201ENST00000410966 333 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 NPM1P11-201ENST00000417106 855 ntBASIC3.69□□□□□ -1.82
CHD8Q9HCK8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms