Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 MTND4P22-201ENST00000413116 1169 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 RPL7P29-201ENST00000437151 728 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AL117351.1-201ENST00000438864 766 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 FGF7P5-201ENST00000441829 291 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 OR7E125P-201ENST00000443450 846 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 NPM1P13-201ENST00000452663 865 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 ATG12P2-201ENST00000456830 416 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 GYG1P1-201ENST00000460864 698 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 RPL7P48-201ENST00000461513 746 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 RPL7P16-201ENST00000479738 738 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 BET1P1-201ENST00000482276 359 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 RPS3AP22-201ENST00000488297 769 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 CEACAMP10-202ENST00000495431 496 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC113347.3-201ENST00000509113 148 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 COX6B1P5-201ENST00000509843 249 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 MTCO3P28-201ENST00000513351 515 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 BNIP3P1-201ENST00000547295 580 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 NMNAT1P1-201ENST00000554095 876 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AL354943.1-201ENST00000572103 781 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC022662.1-201ENST00000580252 331 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AP003392.5-201ENST00000607857 415 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AL049794.2-201ENST00000616301 365 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 AL122125.1-201ENST00000616999 600 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 NSRP1P1-201ENST00000444067 1693 ntBASIC5.08□□□□□ -1.6
USP29Q9HBJ7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP29Q9HBJ7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AC009643.2-201ENST00000603543 1448 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AC138393.1-206ENST00000540997 1886 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AC000367.1-201ENST00000452711 1766 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 SCARNA15-201ENST00000607520 4325 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 RNU6-225P-201ENST00000384613 103 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 RNA5SP296-201ENST00000410523 111 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 RN7SKP222-201ENST00000410651 315 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 GJA6P-201ENST00000415117 1042 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AL360081.1-201ENST00000428299 555 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 COX7BP2-201ENST00000437976 242 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 RPS26P30-201ENST00000443431 335 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AL929288.2-201ENST00000446368 407 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AC234781.3-201ENST00000452540 973 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 RN7SL860P-201ENST00000473738 223 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AC090686.1-201ENST00000481577 749 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 RNA5SP392-201ENST00000516905 112 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AC087373.1-201ENST00000524920 491 ntBASIC5.07□□□□□ -1.6
USP29Q9HBJ7 AP000926.4-201ENST00000527351 454 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms