Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 RNU6-252P-201ENST00000363232 107 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 MIR142-201ENST00000384835 87 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 HMGB1P10-201ENST00000395823 563 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AL583835.1-201ENST00000399570 407 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AL590762.4-201ENST00000425885 253 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AL353093.1-201ENST00000441292 436 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AL357520.1-201ENST00000441557 453 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 RPS3AP53-201ENST00000454716 778 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 RPS3AP41-201ENST00000462701 778 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 OR52A4P-201ENST00000472867 958 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 MTND6P6-201ENST00000478031 263 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 SNORD116-26-201ENST00000516006 96 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AP000827.1-201ENST00000527814 258 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 BRD9P1-201ENST00000529855 560 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC063949.1-201ENST00000552900 865 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 MIR3934-201ENST00000579806 107 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC115085.1-201ENST00000588924 229 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AP003117.1-201ENST00000602771 554 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AC011374.2-201ENST00000607135 526 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AL445528.2-201ENST00000620582 470 ntBASIC4.44□□□□□ -1.7
DDX47Q9H0S4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.44□□□□□ -1.7
DDX47Q9H0S4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 RNA5SP175-201ENST00000364275 119 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 SNORA37-201ENST00000384504 129 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 MIR298-201ENST00000401212 88 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 HMGB1P13-201ENST00000406019 642 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 MTCYBP21-201ENST00000443300 1113 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AC097499.1-201ENST00000444277 208 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 HMGB3P21-201ENST00000452483 547 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AC010285.3-201ENST00000511668 676 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 MIR4436B2-201ENST00000581415 91 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 MIR4436B1-201ENST00000583272 91 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 CR392039.4-201ENST00000624968 501 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 FRG1DP-201ENST00000635586 771 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AC008013.2-202ENST00000637965 364 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 AL133243.3-201ENST00000617415 3004 ntBASIC4.43□□□□□ -1.7
DDX47Q9H0S4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
DDX47Q9H0S4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.42□□□□□ -1.7
DDX47Q9H0S4 RNU6-98P-201ENST00000384173 107 ntBASIC4.42□□□□□ -1.7
DDX47Q9H0S4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms