Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC008694.2-201ENST00000517591 306 ntBASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 AC022695.1-201ENST00000522089 237 ntBASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 EIF4BP1-201ENST00000554881 351 ntBASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 AC016839.1-201ENST00000578162 867 ntBASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
SHANK3Q9BYB0 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 RN7SKP74-201ENST00000362849 309 ntBASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 AL591503.2-201ENST00000442314 1005 ntBASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 RPL21P23-201ENST00000446654 460 ntBASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 AC010486.1-201ENST00000511793 424 ntBASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 AC119674.1-212ENST00000641155 993 ntBASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 AC005261.6-201ENST00000623072 1387 ntBASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 A2MP1-204ENST00000566278 4130 ntBASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 SRP72P2-201ENST00000344851 1979 ntBASIC5.01□□□□□ -1.61
SHANK3Q9BYB0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHANK3Q9BYB0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AL121878.1-201ENST00000418638 859 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 GEMIN8P3-201ENST00000445417 720 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC006511.1-201ENST00000470614 315 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 RPL31P61-201ENST00000496160 376 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 RNA5SP208-201ENST00000516156 78 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 SNORD91B-202ENST00000608459 222 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHANK3Q9BYB0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 ANKRD36P1-201ENST00000344424 659 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 RPL12P18-201ENST00000437175 325 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC025518.1-201ENST00000479856 347 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 RAC1P2-201ENST00000511164 579 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 RNU6-513P-201ENST00000516104 104 ntBASIC5□□□□□ -1.61
SHANK3Q9BYB0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHANK3Q9BYB0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5□□□□□ -1.61
SHANK3Q9BYB0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 BDP1P-201ENST00000582658 1990 ntBASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 AC008802.1-201ENST00000519121 791 ntBASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 LSM1P2-201ENST00000604911 322 ntBASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 AL138820.1-201ENST00000617901 5305 ntBASIC4.99□□□□□ -1.61
SHANK3Q9BYB0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 RNU1-15P-201ENST00000353977 144 ntBASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 CBX1P3-201ENST00000413296 527 ntBASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 AL160175.1-201ENST00000428124 247 ntBASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 HMGB1P37-201ENST00000439613 609 ntBASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 RN7SL809P-201ENST00000482040 297 ntBASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 RN7SKP46-201ENST00000515942 234 ntBASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.98□□□□□ -1.61
SHANK3Q9BYB0 OR51C1P-201ENST00000608504 942 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms