Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC096644.3-201ENST00000416788 338 ntBASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 RAB9AP5-201ENST00000437794 597 ntBASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 RAB9AP2-201ENST00000443911 597 ntBASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 AF213884.1-201ENST00000488102 463 ntBASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 AC068020.1-201ENST00000594215 661 ntBASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 AC067838.1-201ENST00000606064 577 ntBASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 AC090912.3-201ENST00000609775 533 ntBASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 AC006840.1-201ENST00000623069 542 ntBASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPAP1Q9BWH6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AC098592.2-201ENST00000413158 265 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AL133547.1-201ENST00000448546 220 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 HMGB3P22-202ENST00000451823 572 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 FGF7P3-201ENST00000454645 303 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 RPL7P1-201ENST00000468161 747 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 RPL7P9-201ENST00000468715 747 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 RPL23AP2-201ENST00000471227 466 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AC098583.1-201ENST00000480875 255 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 SNORD116-30-201ENST00000516468 85 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 OR1AB1P-201ENST00000585564 761 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AL137072.1-201ENST00000603444 466 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AC114878.2-201ENST00000604863 1251 ntBASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
RPAP1Q9BWH6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 MIR208A-201ENST00000362287 71 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 PTMAP2-201ENST00000397627 327 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 TCEA1P4-201ENST00000415066 844 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AC004552.1-201ENST00000419089 348 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 MTCYBP14-201ENST00000457471 715 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 RPL38P1-201ENST00000460914 211 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 RPS26P3-201ENST00000470205 348 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AC090543.2-201ENST00000483963 348 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AC004057.1-201ENST00000485827 348 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AGGF1P3-201ENST00000493675 1213 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AC017037.1-201ENST00000508460 471 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AL358913.1-201ENST00000554342 121 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AP005901.4-201ENST00000577336 569 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AC024220.1-201ENST00000603675 484 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AC095038.2-201ENST00000621464 1070 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 MIR6500-201ENST00000622700 86 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AC106871.1-201ENST00000568324 3102 ntBASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.94□□□□□ -1.62
RPAP1Q9BWH6 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.93□□□□□ -1.62
RPAP1Q9BWH6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms