Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL118520.1-201ENST00000450770 291 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 RPL12P25-201ENST00000455592 494 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC099340.1-201ENST00000475247 599 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 RN7SL174P-201ENST00000475578 289 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC097473.1-201ENST00000508142 408 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC091849.1-201ENST00000509920 121 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 DCAF13P2-201ENST00000514188 555 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 RN7SKP233-201ENST00000517005 110 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC023968.1-201ENST00000560719 475 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 AL138895.2-201ENST00000603019 178 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 RN7SL126P-201ENST00000616400 299 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 AC000123.2-201ENST00000623124 461 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PHOX2BQ99453 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PHOX2BQ99453 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PHOX2BQ99453 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PHOX2BQ99453 AL391262.1-201ENST00000556558 1992 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.24□□□□□ -1.25
PHOX2BQ99453 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PHOX2BQ99453 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.24□□□□□ -1.25
PHOX2BQ99453 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC016745.2-201ENST00000608834 3443 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 PNPT1P2-201ENST00000456768 2050 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 Y_RNA.167-201ENST00000363735 109 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 Y_RNA.257-201ENST00000364596 102 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 RN7SKP55-201ENST00000364888 307 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 SET-203ENST00000372688 801 ntTSL 2 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 SNORA75B-201ENST00000384053 137 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 Y_RNA.527-201ENST00000384573 102 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 MIR555-201ENST00000384987 96 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 AL391417.1-201ENST00000404100 426 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 RNU4-61P-201ENST00000411243 107 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 RNU2-22P-201ENST00000411266 212 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC092042.2-201ENST00000417304 331 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 NRBF2P3-201ENST00000432731 865 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 RPL21P133-201ENST00000443666 476 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC073109.1-201ENST00000445066 978 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 AL133244.1-201ENST00000456007 258 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 RN7SL88P-201ENST00000480166 299 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 RN7SL284P-201ENST00000498823 275 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 HMGB1P41-201ENST00000520234 440 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 MIR3672-201ENST00000584290 82 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 SNX29P2-204ENST00000603801 875 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC104662.1-201ENST00000604448 511 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC004241.2-201ENST00000614562 444 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 NAA60-237ENST00000615865 326 ntTSL 5 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC010378.1-201ENST00000619270 362 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 AL669831.3-213ENST00000636676 183 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.23□□□□□ -1.25
PHOX2BQ99453 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 AP003486.1-201ENST00000525716 3994 ntBASIC7.23□□□□□ -1.25
PHOX2BQ99453 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 LINC00536-201ENST00000505156 2692 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PHOX2BQ99453 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms