Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 SNORA11C-201ENST00000408532 129 ntBASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 MIR1251-201ENST00000408552 70 ntBASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 AP000619.3-201ENST00000535634 1127 ntBASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 AC005344.1-201ENST00000613391 459 ntBASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 AC020978.9-201ENST00000624380 1141 ntBASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.55□□□□□ -1.68
CDK5RAP2Q96SN8 AC006042.3-201ENST00000454684 1469 ntBASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 AC084198.1-201ENST00000477747 402 ntBASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 RPL21P6-201ENST00000479171 504 ntBASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 ACTR3P3-201ENST00000480448 893 ntBASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 PAICSP4-201ENST00000517543 1253 ntBASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 SNORA3C-201ENST00000408792 125 ntBASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 RN7SKP199-201ENST00000410325 305 ntBASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 AC018644.1-201ENST00000429934 551 ntBASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 RPL7P4-203ENST00000430239 730 ntBASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK5RAP2Q96SN8 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 UBE3AP2-201ENST00000429033 2259 ntBASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 AC010469.1-201ENST00000463864 576 ntBASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 RAC1P2-201ENST00000511164 579 ntBASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 TRAV15-201ENST00000556680 249 ntBASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 LINC01109-201ENST00000603837 3081 ntBASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK5RAP2Q96SN8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 RHOT1P2-201ENST00000366423 333 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 TCEA1P4-201ENST00000415066 844 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 KRR1P1-201ENST00000419430 803 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 NPM1P34-201ENST00000428821 893 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 RN7SKP18-201ENST00000516005 275 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 SNORA70.18-201ENST00000516696 98 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 IGKV2-38-201ENST00000517443 247 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 AC015908.5-201ENST00000623289 343 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 RNU1-108P-201ENST00000362556 161 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 SNORA11.2-201ENST00000408318 127 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 AC104619.4-201ENST00000510773 249 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 HMGN1P15-201ENST00000513870 295 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 RNA5SP164-201ENST00000516533 110 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 OR7E13P-201ENST00000526052 910 ntBASIC4.52□□□□□ -1.69
CDK5RAP2Q96SN8 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms